Gene : Bradi1g06480 B. distachyon v3.1
Defline:  (1 of 2) PTHR15835:SF6 - F20D23.9 PROTEIN Genomic Order:  834
Name:  ? Bradi1g06480 Secondary Identifier:  ? PAC:32796290
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g06480 0.5kb upstream 0.5kb upstream 6834 true Bd1: 4349769-4356602 Brachypodium distachyon
Bradi1g06480 0.5kb upstream 0.5kb upstream 500 false Bd1: 4349769-4350268 Brachypodium distachyon
Bradi1g06480 0.5kb downstream 0.5kb downstream 6834 true Bd1: 4350269-4357102 Brachypodium distachyon
Bradi1g06480 0.5kb downstream 0.5kb downstream 500 false Bd1: 4356603-4357102 Brachypodium distachyon
Bradi1g06480 1.0kb upstream 1.0kb upstream 7334 true Bd1: 4349269-4356602 Brachypodium distachyon
Bradi1g06480 1.0kb upstream 1.0kb upstream 1000 false Bd1: 4349269-4350268 Brachypodium distachyon
Bradi1g06480 1.0kb downstream 1.0kb downstream 7334 true Bd1: 4350269-4357602 Brachypodium distachyon
Bradi1g06480 1.0kb downstream 1.0kb downstream 1000 false Bd1: 4356603-4357602 Brachypodium distachyon
Bradi1g06480 2.0kb upstream 2.0kb upstream 8334 true Bd1: 4348269-4356602 Brachypodium distachyon
Bradi1g06480 2.0kb upstream 2.0kb upstream 2000 false Bd1: 4348269-4350268 Brachypodium distachyon
Bradi1g06480 2.0kb downstream 2.0kb downstream 8334 true Bd1: 4350269-4358602 Brachypodium distachyon
Bradi1g06480 2.0kb downstream 2.0kb downstream 2000 false Bd1: 4356603-4358602 Brachypodium distachyon
Bradi1g06480 5.0kb upstream 5.0kb upstream 11334 true Bd1: 4345269-4356602 Brachypodium distachyon
Bradi1g06480 5.0kb upstream 5.0kb upstream 5000 false Bd1: 4345269-4350268 Brachypodium distachyon
Bradi1g06480 5.0kb downstream 5.0kb downstream 11334 true Bd1: 4350269-4361602 Brachypodium distachyon
Bradi1g06480 5.0kb downstream 5.0kb downstream 5000 false Bd1: 4356603-4361602 Brachypodium distachyon
Bradi1g06480 10.0kb upstream 10.0kb upstream 16334 true Bd1: 4340269-4356602 Brachypodium distachyon
Bradi1g06480 10.0kb upstream 10.0kb upstream 10000 false Bd1: 4340269-4350268 Brachypodium distachyon
Bradi1g06480 10.0kb downstream 10.0kb downstream 16334 true Bd1: 4350269-4366602 Brachypodium distachyon
Bradi1g06480 10.0kb downstream 10.0kb downstream 10000 false Bd1: 4356603-4366602 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578089 5269 Grass View MSA
122045588 5273 Angiosperm View MSA
121349794 5274 Embryophyte View MSA
123428489 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.328        
cufflinks 7.051        
cufflinks 7.683        
cufflinks 5.437        
cufflinks 2.648       Low
cufflinks 7.417        
cufflinks 6.385        
cufflinks 5.916        
cufflinks 7.348        
cufflinks 5.128        
cufflinks 11.758     High High
cufflinks 9.922     High High
cufflinks 9.864     High High
cufflinks 7.987     High  
cufflinks 4.529        
cufflinks 8.006        
cufflinks 3.232        
cufflinks 7.013        
cufflinks 3.642        
cufflinks 1.721       Low
cufflinks 4.423        
cufflinks 8.927        
cufflinks 5.313        
cufflinks 6.208        
cufflinks 5.733        
cufflinks 6.809        
cufflinks 10.886     High High
cufflinks 6.82        
cufflinks 6.78        
cufflinks 7.284        

0 Strain