Gene : Bradi1g06640 B. distachyon v3.1
Defline:  (1 of 1) K16615 - actin-related protein 7, plant (PARP7) Genomic Order:  855
Name:  ? Bradi1g06640 Secondary Identifier:  ? PAC:32802756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g06640 0.5kb upstream 0.5kb upstream 7003 true Bd1: 4547517-4554519 Brachypodium distachyon
Bradi1g06640 0.5kb upstream 0.5kb upstream 500 false Bd1: 4554020-4554519 Brachypodium distachyon
Bradi1g06640 0.5kb downstream 0.5kb downstream 7003 true Bd1: 4547017-4554019 Brachypodium distachyon
Bradi1g06640 0.5kb downstream 0.5kb downstream 500 false Bd1: 4547017-4547516 Brachypodium distachyon
Bradi1g06640 1.0kb upstream 1.0kb upstream 7503 true Bd1: 4547517-4555019 Brachypodium distachyon
Bradi1g06640 1.0kb upstream 1.0kb upstream 1000 false Bd1: 4554020-4555019 Brachypodium distachyon
Bradi1g06640 1.0kb downstream 1.0kb downstream 7503 true Bd1: 4546517-4554019 Brachypodium distachyon
Bradi1g06640 1.0kb downstream 1.0kb downstream 1000 false Bd1: 4546517-4547516 Brachypodium distachyon
Bradi1g06640 2.0kb upstream 2.0kb upstream 8503 true Bd1: 4547517-4556019 Brachypodium distachyon
Bradi1g06640 2.0kb upstream 2.0kb upstream 2000 false Bd1: 4554020-4556019 Brachypodium distachyon
Bradi1g06640 2.0kb downstream 2.0kb downstream 8503 true Bd1: 4545517-4554019 Brachypodium distachyon
Bradi1g06640 2.0kb downstream 2.0kb downstream 2000 false Bd1: 4545517-4547516 Brachypodium distachyon
Bradi1g06640 5.0kb upstream 5.0kb upstream 11503 true Bd1: 4547517-4559019 Brachypodium distachyon
Bradi1g06640 5.0kb upstream 5.0kb upstream 5000 false Bd1: 4554020-4559019 Brachypodium distachyon
Bradi1g06640 5.0kb downstream 5.0kb downstream 11503 true Bd1: 4542517-4554019 Brachypodium distachyon
Bradi1g06640 5.0kb downstream 5.0kb downstream 5000 false Bd1: 4542517-4547516 Brachypodium distachyon
Bradi1g06640 10.0kb upstream 10.0kb upstream 16503 true Bd1: 4547517-4564019 Brachypodium distachyon
Bradi1g06640 10.0kb upstream 10.0kb upstream 10000 false Bd1: 4554020-4564019 Brachypodium distachyon
Bradi1g06640 10.0kb downstream 10.0kb downstream 16503 true Bd1: 4537517-4554019 Brachypodium distachyon
Bradi1g06640 10.0kb downstream 10.0kb downstream 10000 false Bd1: 4537517-4547516 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572056 5269 Grass View MSA
122047685 5273 Angiosperm View MSA
121343857 5274 Embryophyte View MSA
123428641 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.456        
cufflinks 4.201        
cufflinks 4.003        
cufflinks 3.807        
cufflinks 3.881        
cufflinks 3.736        
cufflinks 4.076        
cufflinks 3.811        
cufflinks 3.74        
cufflinks 2.61        
cufflinks 2.424        
cufflinks 3.275        
cufflinks 1.7       Low
cufflinks 1.962       Low
cufflinks 2.661        
cufflinks 3.636        
cufflinks 3.769        
cufflinks 5.472       High
cufflinks 4.395        
cufflinks 1.82       Low
cufflinks 3.673        
cufflinks 3.452        
cufflinks 3.625        
cufflinks 3.464        
cufflinks 3.485        
cufflinks 3.294        
cufflinks 1.625       Low
cufflinks 2.997        
cufflinks 2.91        
cufflinks 4.063        

0 Strain