Gene : Bradi1g06810 B. distachyon v3.1
Defline:  (1 of 2) K00088 - IMP dehydrogenase (guaB) Genomic Order:  877
Name:  ? Bradi1g06810 Secondary Identifier:  ? PAC:32805527
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5695 Brachypodium distachyon pathologic  
Bdistachyon PWY-6596 Brachypodium distachyon pathologic  
Bdistachyon PWY-7221 Brachypodium distachyon pathologic  
Bdistachyon PWY-7228 Brachypodium distachyon pathologic  
Bdistachyon PWY-841 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g06810 0.5kb upstream 0.5kb upstream 4364 true Bd1: 4630158-4634521 Brachypodium distachyon
Bradi1g06810 0.5kb upstream 0.5kb upstream 500 false Bd1: 4634022-4634521 Brachypodium distachyon
Bradi1g06810 0.5kb downstream 0.5kb downstream 4364 true Bd1: 4629658-4634021 Brachypodium distachyon
Bradi1g06810 0.5kb downstream 0.5kb downstream 500 false Bd1: 4629658-4630157 Brachypodium distachyon
Bradi1g06810 1.0kb upstream 1.0kb upstream 4864 true Bd1: 4630158-4635021 Brachypodium distachyon
Bradi1g06810 1.0kb upstream 1.0kb upstream 1000 false Bd1: 4634022-4635021 Brachypodium distachyon
Bradi1g06810 1.0kb downstream 1.0kb downstream 4864 true Bd1: 4629158-4634021 Brachypodium distachyon
Bradi1g06810 1.0kb downstream 1.0kb downstream 1000 false Bd1: 4629158-4630157 Brachypodium distachyon
Bradi1g06810 2.0kb upstream 2.0kb upstream 5864 true Bd1: 4630158-4636021 Brachypodium distachyon
Bradi1g06810 2.0kb upstream 2.0kb upstream 2000 false Bd1: 4634022-4636021 Brachypodium distachyon
Bradi1g06810 2.0kb downstream 2.0kb downstream 5864 true Bd1: 4628158-4634021 Brachypodium distachyon
Bradi1g06810 2.0kb downstream 2.0kb downstream 2000 false Bd1: 4628158-4630157 Brachypodium distachyon
Bradi1g06810 5.0kb upstream 5.0kb upstream 8864 true Bd1: 4630158-4639021 Brachypodium distachyon
Bradi1g06810 5.0kb upstream 5.0kb upstream 5000 false Bd1: 4634022-4639021 Brachypodium distachyon
Bradi1g06810 5.0kb downstream 5.0kb downstream 8864 true Bd1: 4625158-4634021 Brachypodium distachyon
Bradi1g06810 5.0kb downstream 5.0kb downstream 5000 false Bd1: 4625158-4630157 Brachypodium distachyon
Bradi1g06810 10.0kb upstream 10.0kb upstream 13864 true Bd1: 4630158-4644021 Brachypodium distachyon
Bradi1g06810 10.0kb upstream 10.0kb upstream 10000 false Bd1: 4634022-4644021 Brachypodium distachyon
Bradi1g06810 10.0kb downstream 10.0kb downstream 13864 true Bd1: 4620158-4634021 Brachypodium distachyon
Bradi1g06810 10.0kb downstream 10.0kb downstream 10000 false Bd1: 4620158-4630157 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577772 5269 Grass View MSA
122042253 5273 Angiosperm View MSA
121346920 5274 Embryophyte View MSA
123424189 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.718        
cufflinks 15.747     High  
cufflinks 13.35     High  
cufflinks 12.243     High  
cufflinks 6.458        
cufflinks 13.645     High  
cufflinks 15.786     High  
cufflinks 11.839     High  
cufflinks 12.317     High  
cufflinks 6.992        
cufflinks 7.329        
cufflinks 10.971     High  
cufflinks 4.481       Low
cufflinks 4.471       Low
cufflinks 4.818       Low
cufflinks 14.171     High  
cufflinks 11.944     High  
cufflinks 25.371     High High
cufflinks 17.111     High High
cufflinks 13.06     High  
cufflinks 15.828     High  
cufflinks 10.685     High  
cufflinks 9.972     High  
cufflinks 10.278     High  
cufflinks 12.832     High  
cufflinks 9.053        
cufflinks 6.13       Low
cufflinks 9.251        
cufflinks 9.216        
cufflinks 18.641     High High

0 Strain