Gene : Bradi1g07260 B. distachyon v3.1
Defline:  (1 of 1) PTHR10641:SF654 - TRANSCRIPTION FACTOR RAX1-RELATED Genomic Order:  938
Name:  ? Bradi1g07260 Secondary Identifier:  ? PAC:32805980
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g07260 0.5kb upstream 0.5kb upstream 2083 true Bd1: 5071082-5073164 Brachypodium distachyon
Bradi1g07260 0.5kb upstream 0.5kb upstream 500 false Bd1: 5071082-5071581 Brachypodium distachyon
Bradi1g07260 0.5kb downstream 0.5kb downstream 2083 true Bd1: 5071582-5073664 Brachypodium distachyon
Bradi1g07260 0.5kb downstream 0.5kb downstream 500 false Bd1: 5073165-5073664 Brachypodium distachyon
Bradi1g07260 1.0kb upstream 1.0kb upstream 2583 true Bd1: 5070582-5073164 Brachypodium distachyon
Bradi1g07260 1.0kb upstream 1.0kb upstream 1000 false Bd1: 5070582-5071581 Brachypodium distachyon
Bradi1g07260 1.0kb downstream 1.0kb downstream 2583 true Bd1: 5071582-5074164 Brachypodium distachyon
Bradi1g07260 1.0kb downstream 1.0kb downstream 1000 false Bd1: 5073165-5074164 Brachypodium distachyon
Bradi1g07260 2.0kb upstream 2.0kb upstream 3583 true Bd1: 5069582-5073164 Brachypodium distachyon
Bradi1g07260 2.0kb upstream 2.0kb upstream 2000 false Bd1: 5069582-5071581 Brachypodium distachyon
Bradi1g07260 2.0kb downstream 2.0kb downstream 3583 true Bd1: 5071582-5075164 Brachypodium distachyon
Bradi1g07260 2.0kb downstream 2.0kb downstream 2000 false Bd1: 5073165-5075164 Brachypodium distachyon
Bradi1g07260 5.0kb upstream 5.0kb upstream 6583 true Bd1: 5066582-5073164 Brachypodium distachyon
Bradi1g07260 5.0kb upstream 5.0kb upstream 5000 false Bd1: 5066582-5071581 Brachypodium distachyon
Bradi1g07260 5.0kb downstream 5.0kb downstream 6583 true Bd1: 5071582-5078164 Brachypodium distachyon
Bradi1g07260 5.0kb downstream 5.0kb downstream 5000 false Bd1: 5073165-5078164 Brachypodium distachyon
Bradi1g07260 10.0kb upstream 10.0kb upstream 11583 true Bd1: 5061582-5073164 Brachypodium distachyon
Bradi1g07260 10.0kb upstream 10.0kb upstream 10000 false Bd1: 5061582-5071581 Brachypodium distachyon
Bradi1g07260 10.0kb downstream 10.0kb downstream 11583 true Bd1: 5071582-5083164 Brachypodium distachyon
Bradi1g07260 10.0kb downstream 10.0kb downstream 10000 false Bd1: 5073165-5083164 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589911 5269 Grass View MSA
122047860 5273 Angiosperm View MSA
121310809 5274 Embryophyte View MSA
123348206 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.131        
cufflinks 0.012     Low  
cufflinks 0.067     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 0.077     Low  
cufflinks 0.051     Low  
cufflinks 0.063     Low  
cufflinks 0.058     Low  
cufflinks 0.01     Low Low
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.021     Low  
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 17.418     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.256        
cufflinks 0.037     Low  
cufflinks 0.045     Low  
cufflinks 0.029     Low  
cufflinks 0.098     Low  
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  
cufflinks 0.082     Low  
cufflinks 0.049     Low  

0 Strain