Gene : Bradi1g07170 B. distachyon v3.1
Defline:  (1 of 1) PTHR11540//PTHR11540:SF26 - MALATE AND LACTATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  924
Name:  ? Bradi1g07170 Secondary Identifier:  ? PAC:32800394
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon GLUCONEO-PWY Brachypodium distachyon pathologic  
Bdistachyon GLYOXYLATE-BYPASS Brachypodium distachyon pathologic  
Bdistachyon PWY-5464 Brachypodium distachyon pathologic  
Bdistachyon PWY-561 Brachypodium distachyon pathologic  
Bdistachyon PWY-5690 Brachypodium distachyon pathologic  
Bdistachyon PWY-5913 Brachypodium distachyon pathologic  
Bdistachyon PWY-7115 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g07170 0.5kb upstream 0.5kb upstream 4457 true Bd1: 4995276-4999732 Brachypodium distachyon
Bradi1g07170 0.5kb upstream 0.5kb upstream 500 false Bd1: 4995276-4995775 Brachypodium distachyon
Bradi1g07170 0.5kb downstream 0.5kb downstream 4457 true Bd1: 4995776-5000232 Brachypodium distachyon
Bradi1g07170 0.5kb downstream 0.5kb downstream 500 false Bd1: 4999733-5000232 Brachypodium distachyon
Bradi1g07170 1.0kb upstream 1.0kb upstream 4957 true Bd1: 4994776-4999732 Brachypodium distachyon
Bradi1g07170 1.0kb upstream 1.0kb upstream 1000 false Bd1: 4994776-4995775 Brachypodium distachyon
Bradi1g07170 1.0kb downstream 1.0kb downstream 4957 true Bd1: 4995776-5000732 Brachypodium distachyon
Bradi1g07170 1.0kb downstream 1.0kb downstream 1000 false Bd1: 4999733-5000732 Brachypodium distachyon
Bradi1g07170 2.0kb upstream 2.0kb upstream 5957 true Bd1: 4993776-4999732 Brachypodium distachyon
Bradi1g07170 2.0kb upstream 2.0kb upstream 2000 false Bd1: 4993776-4995775 Brachypodium distachyon
Bradi1g07170 2.0kb downstream 2.0kb downstream 5957 true Bd1: 4995776-5001732 Brachypodium distachyon
Bradi1g07170 2.0kb downstream 2.0kb downstream 2000 false Bd1: 4999733-5001732 Brachypodium distachyon
Bradi1g07170 5.0kb upstream 5.0kb upstream 8957 true Bd1: 4990776-4999732 Brachypodium distachyon
Bradi1g07170 5.0kb upstream 5.0kb upstream 5000 false Bd1: 4990776-4995775 Brachypodium distachyon
Bradi1g07170 5.0kb downstream 5.0kb downstream 8957 true Bd1: 4995776-5004732 Brachypodium distachyon
Bradi1g07170 5.0kb downstream 5.0kb downstream 5000 false Bd1: 4999733-5004732 Brachypodium distachyon
Bradi1g07170 10.0kb upstream 10.0kb upstream 13957 true Bd1: 4985776-4999732 Brachypodium distachyon
Bradi1g07170 10.0kb upstream 10.0kb upstream 10000 false Bd1: 4985776-4995775 Brachypodium distachyon
Bradi1g07170 10.0kb downstream 10.0kb downstream 13957 true Bd1: 4995776-5009732 Brachypodium distachyon
Bradi1g07170 10.0kb downstream 10.0kb downstream 10000 false Bd1: 4999733-5009732 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580576 5269 Grass View MSA
122041534 5273 Angiosperm View MSA
121344614 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 100.94     High  
cufflinks 116.208     High  
cufflinks 181.075     High  
cufflinks 145.369     High  
cufflinks 93.19     High  
cufflinks 94.1     High  
cufflinks 96.226     High  
cufflinks 123.608     High  
cufflinks 106.35     High  
cufflinks 100.108     High  
cufflinks 197.214     High  
cufflinks 91.344     High  
cufflinks 140.18     High  
cufflinks 193.23     High  
cufflinks 132.715     High  
cufflinks 101.65     High  
cufflinks 110.595     High  
cufflinks 3.886       Low
cufflinks 77.556     High  
cufflinks 49.675     High  
cufflinks 38.576     High  
cufflinks 105.141     High  
cufflinks 128.677     High  
cufflinks 119.624     High  
cufflinks 95.777     High  
cufflinks 167.876     High  
cufflinks 201.181     High  
cufflinks 174.823     High  
cufflinks 146.934     High  
cufflinks 20.013     High Low

0 Strain