Gene : Bradi1g07457 B. distachyon v3.1
Defline:  (1 of 27) PF03000 - NPH3 family (NPH3) Genomic Order:  962
Name:  ? Bradi1g07457 Secondary Identifier:  ? PAC:32792011
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g07457 0.5kb upstream 0.5kb upstream 3533 true Bd1: 5226909-5230441 Brachypodium distachyon
Bradi1g07457 0.5kb upstream 0.5kb upstream 500 false Bd1: 5229942-5230441 Brachypodium distachyon
Bradi1g07457 0.5kb downstream 0.5kb downstream 3533 true Bd1: 5226409-5229941 Brachypodium distachyon
Bradi1g07457 0.5kb downstream 0.5kb downstream 500 false Bd1: 5226409-5226908 Brachypodium distachyon
Bradi1g07457 1.0kb upstream 1.0kb upstream 4033 true Bd1: 5226909-5230941 Brachypodium distachyon
Bradi1g07457 1.0kb upstream 1.0kb upstream 1000 false Bd1: 5229942-5230941 Brachypodium distachyon
Bradi1g07457 1.0kb downstream 1.0kb downstream 4033 true Bd1: 5225909-5229941 Brachypodium distachyon
Bradi1g07457 1.0kb downstream 1.0kb downstream 1000 false Bd1: 5225909-5226908 Brachypodium distachyon
Bradi1g07457 2.0kb upstream 2.0kb upstream 5033 true Bd1: 5226909-5231941 Brachypodium distachyon
Bradi1g07457 2.0kb upstream 2.0kb upstream 2000 false Bd1: 5229942-5231941 Brachypodium distachyon
Bradi1g07457 2.0kb downstream 2.0kb downstream 5033 true Bd1: 5224909-5229941 Brachypodium distachyon
Bradi1g07457 2.0kb downstream 2.0kb downstream 2000 false Bd1: 5224909-5226908 Brachypodium distachyon
Bradi1g07457 5.0kb upstream 5.0kb upstream 8033 true Bd1: 5226909-5234941 Brachypodium distachyon
Bradi1g07457 5.0kb upstream 5.0kb upstream 5000 false Bd1: 5229942-5234941 Brachypodium distachyon
Bradi1g07457 5.0kb downstream 5.0kb downstream 8033 true Bd1: 5221909-5229941 Brachypodium distachyon
Bradi1g07457 5.0kb downstream 5.0kb downstream 5000 false Bd1: 5221909-5226908 Brachypodium distachyon
Bradi1g07457 10.0kb upstream 10.0kb upstream 13033 true Bd1: 5226909-5239941 Brachypodium distachyon
Bradi1g07457 10.0kb upstream 10.0kb upstream 10000 false Bd1: 5229942-5239941 Brachypodium distachyon
Bradi1g07457 10.0kb downstream 10.0kb downstream 13033 true Bd1: 5216909-5229941 Brachypodium distachyon
Bradi1g07457 10.0kb downstream 10.0kb downstream 10000 false Bd1: 5216909-5226908 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585068 5269 Grass View MSA
122048903 5273 Angiosperm View MSA
121311163 5274 Embryophyte View MSA
123348497 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.252        
cufflinks 3.078        
cufflinks 2.686        
cufflinks 3.065        
cufflinks 3.221        
cufflinks 2.771        
cufflinks 3.162        
cufflinks 2.998        
cufflinks 3.085        
cufflinks 2.379        
cufflinks 0.074       Low
cufflinks 2.095        
cufflinks 0.154       Low
cufflinks 0.086       Low
cufflinks 1.396        
cufflinks 2.535        
cufflinks 2.162        
cufflinks 4.711        
cufflinks 3.245        
cufflinks 0.651        
cufflinks 2.801        
cufflinks 2.458        
cufflinks 3.986        
cufflinks 2.812        
cufflinks 3.102        
cufflinks 2.099        
cufflinks 0.066     Low Low
cufflinks 2.525        
cufflinks 2.458        
cufflinks 4.88        

0 Strain