Gene : Bradi1g07520 B. distachyon v3.1
Defline:  (1 of 1) PTHR12869 - SMALL SEVEN TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN Genomic Order:  971
Name:  ? Bradi1g07520 Secondary Identifier:  ? PAC:32794087
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g07520 0.5kb upstream 0.5kb upstream 10578 true Bd1: 5267903-5278480 Brachypodium distachyon
Bradi1g07520 0.5kb upstream 0.5kb upstream 500 false Bd1: 5267903-5268402 Brachypodium distachyon
Bradi1g07520 0.5kb downstream 0.5kb downstream 10578 true Bd1: 5268403-5278980 Brachypodium distachyon
Bradi1g07520 0.5kb downstream 0.5kb downstream 500 false Bd1: 5278481-5278980 Brachypodium distachyon
Bradi1g07520 1.0kb upstream 1.0kb upstream 11078 true Bd1: 5267403-5278480 Brachypodium distachyon
Bradi1g07520 1.0kb upstream 1.0kb upstream 1000 false Bd1: 5267403-5268402 Brachypodium distachyon
Bradi1g07520 1.0kb downstream 1.0kb downstream 11078 true Bd1: 5268403-5279480 Brachypodium distachyon
Bradi1g07520 1.0kb downstream 1.0kb downstream 1000 false Bd1: 5278481-5279480 Brachypodium distachyon
Bradi1g07520 2.0kb upstream 2.0kb upstream 12078 true Bd1: 5266403-5278480 Brachypodium distachyon
Bradi1g07520 2.0kb upstream 2.0kb upstream 2000 false Bd1: 5266403-5268402 Brachypodium distachyon
Bradi1g07520 2.0kb downstream 2.0kb downstream 12078 true Bd1: 5268403-5280480 Brachypodium distachyon
Bradi1g07520 2.0kb downstream 2.0kb downstream 2000 false Bd1: 5278481-5280480 Brachypodium distachyon
Bradi1g07520 5.0kb upstream 5.0kb upstream 15078 true Bd1: 5263403-5278480 Brachypodium distachyon
Bradi1g07520 5.0kb upstream 5.0kb upstream 5000 false Bd1: 5263403-5268402 Brachypodium distachyon
Bradi1g07520 5.0kb downstream 5.0kb downstream 15078 true Bd1: 5268403-5283480 Brachypodium distachyon
Bradi1g07520 5.0kb downstream 5.0kb downstream 5000 false Bd1: 5278481-5283480 Brachypodium distachyon
Bradi1g07520 10.0kb upstream 10.0kb upstream 20078 true Bd1: 5258403-5278480 Brachypodium distachyon
Bradi1g07520 10.0kb upstream 10.0kb upstream 10000 false Bd1: 5258403-5268402 Brachypodium distachyon
Bradi1g07520 10.0kb downstream 10.0kb downstream 20078 true Bd1: 5268403-5288480 Brachypodium distachyon
Bradi1g07520 10.0kb downstream 10.0kb downstream 10000 false Bd1: 5278481-5288480 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583772 5269 Grass View MSA
122046816 5273 Angiosperm View MSA
121343820 5274 Embryophyte View MSA
123379923 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.137        
cufflinks 6.328        
cufflinks 5.921        
cufflinks 6.854        
cufflinks 6.853        
cufflinks 5.409        
cufflinks 6.05        
cufflinks 4.697        
cufflinks 4.959        
cufflinks 5.462        
cufflinks 1.504       Low
cufflinks 4.492        
cufflinks 1.233       Low
cufflinks 1.244       Low
cufflinks 4.4        
cufflinks 6.249        
cufflinks 11.402     High High
cufflinks 11.139       High
cufflinks 13.088     High High
cufflinks 6.118        
cufflinks 12.35     High High
cufflinks 5.205        
cufflinks 4.84        
cufflinks 5.449        
cufflinks 6.103        
cufflinks 7.254        
cufflinks 1.692       Low
cufflinks 5.593        
cufflinks 5.381        
cufflinks 10.292        

0 Strain