Gene : Bradi1g07717 B. distachyon v3.1
Defline:  (1 of 1) KOG1863 - Ubiquitin carboxyl-terminal hydrolase Genomic Order:  999
Name:  ? Bradi1g07717 Secondary Identifier:  ? PAC:32796764
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g07717 0.5kb upstream 0.5kb upstream 12816 true Bd1: 5440245-5453060 Brachypodium distachyon
Bradi1g07717 0.5kb upstream 0.5kb upstream 500 false Bd1: 5452561-5453060 Brachypodium distachyon
Bradi1g07717 0.5kb downstream 0.5kb downstream 12816 true Bd1: 5439745-5452560 Brachypodium distachyon
Bradi1g07717 0.5kb downstream 0.5kb downstream 500 false Bd1: 5439745-5440244 Brachypodium distachyon
Bradi1g07717 1.0kb upstream 1.0kb upstream 13316 true Bd1: 5440245-5453560 Brachypodium distachyon
Bradi1g07717 1.0kb upstream 1.0kb upstream 1000 false Bd1: 5452561-5453560 Brachypodium distachyon
Bradi1g07717 1.0kb downstream 1.0kb downstream 13316 true Bd1: 5439245-5452560 Brachypodium distachyon
Bradi1g07717 1.0kb downstream 1.0kb downstream 1000 false Bd1: 5439245-5440244 Brachypodium distachyon
Bradi1g07717 2.0kb upstream 2.0kb upstream 14316 true Bd1: 5440245-5454560 Brachypodium distachyon
Bradi1g07717 2.0kb upstream 2.0kb upstream 2000 false Bd1: 5452561-5454560 Brachypodium distachyon
Bradi1g07717 2.0kb downstream 2.0kb downstream 14316 true Bd1: 5438245-5452560 Brachypodium distachyon
Bradi1g07717 2.0kb downstream 2.0kb downstream 2000 false Bd1: 5438245-5440244 Brachypodium distachyon
Bradi1g07717 5.0kb upstream 5.0kb upstream 17316 true Bd1: 5440245-5457560 Brachypodium distachyon
Bradi1g07717 5.0kb upstream 5.0kb upstream 5000 false Bd1: 5452561-5457560 Brachypodium distachyon
Bradi1g07717 5.0kb downstream 5.0kb downstream 17316 true Bd1: 5435245-5452560 Brachypodium distachyon
Bradi1g07717 5.0kb downstream 5.0kb downstream 5000 false Bd1: 5435245-5440244 Brachypodium distachyon
Bradi1g07717 10.0kb upstream 10.0kb upstream 22316 true Bd1: 5440245-5462560 Brachypodium distachyon
Bradi1g07717 10.0kb upstream 10.0kb upstream 10000 false Bd1: 5452561-5462560 Brachypodium distachyon
Bradi1g07717 10.0kb downstream 10.0kb downstream 22316 true Bd1: 5430245-5452560 Brachypodium distachyon
Bradi1g07717 10.0kb downstream 10.0kb downstream 10000 false Bd1: 5430245-5440244 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581112 5269 Grass View MSA
122043849 5273 Angiosperm View MSA
121347383 5274 Embryophyte View MSA
123427406 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.0        
cufflinks 2.282        
cufflinks 2.421        
cufflinks 1.583        
cufflinks 0.635       Low
cufflinks 1.97        
cufflinks 2.031        
cufflinks 1.682        
cufflinks 2.086        
cufflinks 1.17        
cufflinks 1.57        
cufflinks 2.187        
cufflinks 1.37        
cufflinks 1.36        
cufflinks 0.909        
cufflinks 1.883        
cufflinks 1.225        
cufflinks 2.775       High
cufflinks 2.107        
cufflinks 0.3       Low
cufflinks 1.513        
cufflinks 2.419        
cufflinks 1.902        
cufflinks 1.787        
cufflinks 1.689        
cufflinks 2.035        
cufflinks 1.546        
cufflinks 1.983        
cufflinks 2.07        
cufflinks 2.531        

0 Strain