Gene : Bradi1g08020 B. distachyon v3.1
Defline:  (1 of 2) PTHR10293//PTHR10293:SF16 - GLUTAREDOXIN-RELATED PROTEIN // GLUTAREDOXIN-RELATED PROTEIN 5, MITOCHONDRIAL Genomic Order:  1030
Name:  ? Bradi1g08020 Secondary Identifier:  ? PAC:32795749
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon THIOREDOX-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g08020 0.5kb upstream 0.5kb upstream 3148 true Bd1: 5654980-5658127 Brachypodium distachyon
Bradi1g08020 0.5kb upstream 0.5kb upstream 500 false Bd1: 5657628-5658127 Brachypodium distachyon
Bradi1g08020 0.5kb downstream 0.5kb downstream 3148 true Bd1: 5654480-5657627 Brachypodium distachyon
Bradi1g08020 0.5kb downstream 0.5kb downstream 500 false Bd1: 5654480-5654979 Brachypodium distachyon
Bradi1g08020 1.0kb upstream 1.0kb upstream 3648 true Bd1: 5654980-5658627 Brachypodium distachyon
Bradi1g08020 1.0kb upstream 1.0kb upstream 1000 false Bd1: 5657628-5658627 Brachypodium distachyon
Bradi1g08020 1.0kb downstream 1.0kb downstream 3648 true Bd1: 5653980-5657627 Brachypodium distachyon
Bradi1g08020 1.0kb downstream 1.0kb downstream 1000 false Bd1: 5653980-5654979 Brachypodium distachyon
Bradi1g08020 2.0kb upstream 2.0kb upstream 4648 true Bd1: 5654980-5659627 Brachypodium distachyon
Bradi1g08020 2.0kb upstream 2.0kb upstream 2000 false Bd1: 5657628-5659627 Brachypodium distachyon
Bradi1g08020 2.0kb downstream 2.0kb downstream 4648 true Bd1: 5652980-5657627 Brachypodium distachyon
Bradi1g08020 2.0kb downstream 2.0kb downstream 2000 false Bd1: 5652980-5654979 Brachypodium distachyon
Bradi1g08020 5.0kb upstream 5.0kb upstream 7648 true Bd1: 5654980-5662627 Brachypodium distachyon
Bradi1g08020 5.0kb upstream 5.0kb upstream 5000 false Bd1: 5657628-5662627 Brachypodium distachyon
Bradi1g08020 5.0kb downstream 5.0kb downstream 7648 true Bd1: 5649980-5657627 Brachypodium distachyon
Bradi1g08020 5.0kb downstream 5.0kb downstream 5000 false Bd1: 5649980-5654979 Brachypodium distachyon
Bradi1g08020 10.0kb upstream 10.0kb upstream 12648 true Bd1: 5654980-5667627 Brachypodium distachyon
Bradi1g08020 10.0kb upstream 10.0kb upstream 10000 false Bd1: 5657628-5667627 Brachypodium distachyon
Bradi1g08020 10.0kb downstream 10.0kb downstream 12648 true Bd1: 5644980-5657627 Brachypodium distachyon
Bradi1g08020 10.0kb downstream 10.0kb downstream 10000 false Bd1: 5644980-5654979 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586477 5269 Grass View MSA
122043030 5273 Angiosperm View MSA
121347328 5274 Embryophyte View MSA
123424474 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.28     High  
cufflinks 15.603     High  
cufflinks 14.96     High  
cufflinks 17.309     High  
cufflinks 10.838     High Low
cufflinks 12.852     High  
cufflinks 14.742     High  
cufflinks 12.463     High  
cufflinks 11.977     High  
cufflinks 15.352     High  
cufflinks 12.012     High  
cufflinks 12.498     High  
cufflinks 9.148     High Low
cufflinks 11.35     High  
cufflinks 11.9     High  
cufflinks 15.364     High  
cufflinks 20.483     High High
cufflinks 22.065     High High
cufflinks 22.897     High High
cufflinks 16.723     High  
cufflinks 23.007     High High
cufflinks 14.458     High  
cufflinks 11.726     High  
cufflinks 12.721     High  
cufflinks 14.611     High  
cufflinks 14.917     High  
cufflinks 10.45     High Low
cufflinks 15.203     High  
cufflinks 14.582     High  
cufflinks 20.478     High High

0 Strain