Gene : Bradi1g08460 B. distachyon v3.1
Genomic Order:  1089 Name:  ? Bradi1g08460
Secondary Identifier:  ? PAC:32798730
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g08460 0.5kb upstream 0.5kb upstream 3422 true Bd1: 5973977-5977398 Brachypodium distachyon
Bradi1g08460 0.5kb upstream 0.5kb upstream 500 false Bd1: 5973977-5974476 Brachypodium distachyon
Bradi1g08460 0.5kb downstream 0.5kb downstream 3422 true Bd1: 5974477-5977898 Brachypodium distachyon
Bradi1g08460 0.5kb downstream 0.5kb downstream 500 false Bd1: 5977399-5977898 Brachypodium distachyon
Bradi1g08460 1.0kb upstream 1.0kb upstream 3922 true Bd1: 5973477-5977398 Brachypodium distachyon
Bradi1g08460 1.0kb upstream 1.0kb upstream 1000 false Bd1: 5973477-5974476 Brachypodium distachyon
Bradi1g08460 1.0kb downstream 1.0kb downstream 3922 true Bd1: 5974477-5978398 Brachypodium distachyon
Bradi1g08460 1.0kb downstream 1.0kb downstream 1000 false Bd1: 5977399-5978398 Brachypodium distachyon
Bradi1g08460 2.0kb upstream 2.0kb upstream 4922 true Bd1: 5972477-5977398 Brachypodium distachyon
Bradi1g08460 2.0kb upstream 2.0kb upstream 2000 false Bd1: 5972477-5974476 Brachypodium distachyon
Bradi1g08460 2.0kb downstream 2.0kb downstream 4922 true Bd1: 5974477-5979398 Brachypodium distachyon
Bradi1g08460 2.0kb downstream 2.0kb downstream 2000 false Bd1: 5977399-5979398 Brachypodium distachyon
Bradi1g08460 5.0kb upstream 5.0kb upstream 7922 true Bd1: 5969477-5977398 Brachypodium distachyon
Bradi1g08460 5.0kb upstream 5.0kb upstream 5000 false Bd1: 5969477-5974476 Brachypodium distachyon
Bradi1g08460 5.0kb downstream 5.0kb downstream 7922 true Bd1: 5974477-5982398 Brachypodium distachyon
Bradi1g08460 5.0kb downstream 5.0kb downstream 5000 false Bd1: 5977399-5982398 Brachypodium distachyon
Bradi1g08460 10.0kb upstream 10.0kb upstream 12922 true Bd1: 5964477-5977398 Brachypodium distachyon
Bradi1g08460 10.0kb upstream 10.0kb upstream 10000 false Bd1: 5964477-5974476 Brachypodium distachyon
Bradi1g08460 10.0kb downstream 10.0kb downstream 12922 true Bd1: 5974477-5987398 Brachypodium distachyon
Bradi1g08460 10.0kb downstream 10.0kb downstream 10000 false Bd1: 5977399-5987398 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580888 5269 Grass View MSA
122042114 5273 Angiosperm View MSA
121309925 5274 Embryophyte View MSA
123347555 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.315        
cufflinks 1.385        
cufflinks 1.554        
cufflinks 1.363        
cufflinks 1.597        
cufflinks 1.312        
cufflinks 1.724        
cufflinks 1.168        
cufflinks 1.169        
cufflinks 1.453        
cufflinks 0.336       Low
cufflinks 0.751        
cufflinks 0.171       Low
cufflinks 0.234       Low
cufflinks 0.415       Low
cufflinks 1.238        
cufflinks 1.959        
cufflinks 2.003        
cufflinks 2.949       High
cufflinks 1.007        
cufflinks 1.809        
cufflinks 1.144        
cufflinks 1.186        
cufflinks 0.787        
cufflinks 1.338        
cufflinks 1.477        
cufflinks 0.237       Low
cufflinks 1.864        
cufflinks 1.443        
cufflinks 1.426        

0 Strain