Gene : Bradi1g14450 B. distachyon v3.1
Defline:  (1 of 2) PTHR16092 - SEC3/SYNTAXIN-RELATED Genomic Order:  1827
Name:  ? Bradi1g14450 Secondary Identifier:  ? PAC:32795231
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g14450 0.5kb upstream 0.5kb upstream 16894 true Bd1: 11366693-11383586 Brachypodium distachyon
Bradi1g14450 0.5kb upstream 0.5kb upstream 500 false Bd1: 11366693-11367192 Brachypodium distachyon
Bradi1g14450 0.5kb downstream 0.5kb downstream 16894 true Bd1: 11367193-11384086 Brachypodium distachyon
Bradi1g14450 0.5kb downstream 0.5kb downstream 500 false Bd1: 11383587-11384086 Brachypodium distachyon
Bradi1g14450 1.0kb upstream 1.0kb upstream 17394 true Bd1: 11366193-11383586 Brachypodium distachyon
Bradi1g14450 1.0kb upstream 1.0kb upstream 1000 false Bd1: 11366193-11367192 Brachypodium distachyon
Bradi1g14450 1.0kb downstream 1.0kb downstream 17394 true Bd1: 11367193-11384586 Brachypodium distachyon
Bradi1g14450 1.0kb downstream 1.0kb downstream 1000 false Bd1: 11383587-11384586 Brachypodium distachyon
Bradi1g14450 2.0kb upstream 2.0kb upstream 18394 true Bd1: 11365193-11383586 Brachypodium distachyon
Bradi1g14450 2.0kb upstream 2.0kb upstream 2000 false Bd1: 11365193-11367192 Brachypodium distachyon
Bradi1g14450 2.0kb downstream 2.0kb downstream 18394 true Bd1: 11367193-11385586 Brachypodium distachyon
Bradi1g14450 2.0kb downstream 2.0kb downstream 2000 false Bd1: 11383587-11385586 Brachypodium distachyon
Bradi1g14450 5.0kb upstream 5.0kb upstream 21394 true Bd1: 11362193-11383586 Brachypodium distachyon
Bradi1g14450 5.0kb upstream 5.0kb upstream 5000 false Bd1: 11362193-11367192 Brachypodium distachyon
Bradi1g14450 5.0kb downstream 5.0kb downstream 21394 true Bd1: 11367193-11388586 Brachypodium distachyon
Bradi1g14450 5.0kb downstream 5.0kb downstream 5000 false Bd1: 11383587-11388586 Brachypodium distachyon
Bradi1g14450 10.0kb upstream 10.0kb upstream 26394 true Bd1: 11357193-11383586 Brachypodium distachyon
Bradi1g14450 10.0kb upstream 10.0kb upstream 10000 false Bd1: 11357193-11367192 Brachypodium distachyon
Bradi1g14450 10.0kb downstream 10.0kb downstream 26394 true Bd1: 11367193-11393586 Brachypodium distachyon
Bradi1g14450 10.0kb downstream 10.0kb downstream 10000 false Bd1: 11383587-11393586 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577475 5269 Grass View MSA
122043094 5273 Angiosperm View MSA
121346884 5274 Embryophyte View MSA
123428518 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.823        
cufflinks 2.134        
cufflinks 2.233        
cufflinks 1.96        
cufflinks 1.021       Low
cufflinks 2.015        
cufflinks 1.803        
cufflinks 1.741        
cufflinks 1.847        
cufflinks 1.346        
cufflinks 1.661        
cufflinks 1.827        
cufflinks 1.063        
cufflinks 1.038        
cufflinks 1.321        
cufflinks 2.201        
cufflinks 1.384        
cufflinks 3.124       High
cufflinks 2.229        
cufflinks 0.713       Low
cufflinks 1.887        
cufflinks 2.114        
cufflinks 1.68        
cufflinks 1.844        
cufflinks 1.735        
cufflinks 1.978        
cufflinks 1.251        
cufflinks 1.894        
cufflinks 1.948        
cufflinks 2.298        

0 Strain