Gene : Bradi1g14517 B. distachyon v3.1
Defline:  (1 of 103) PF12776 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_3) Genomic Order:  1841
Name:  ? Bradi1g14517 Secondary Identifier:  ? PAC:32796310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g14517 0.5kb upstream 0.5kb upstream 2689 true Bd1: 11461657-11464345 Brachypodium distachyon
Bradi1g14517 0.5kb upstream 0.5kb upstream 500 false Bd1: 11463846-11464345 Brachypodium distachyon
Bradi1g14517 0.5kb downstream 0.5kb downstream 2689 true Bd1: 11461157-11463845 Brachypodium distachyon
Bradi1g14517 0.5kb downstream 0.5kb downstream 500 false Bd1: 11461157-11461656 Brachypodium distachyon
Bradi1g14517 1.0kb upstream 1.0kb upstream 3189 true Bd1: 11461657-11464845 Brachypodium distachyon
Bradi1g14517 1.0kb upstream 1.0kb upstream 1000 false Bd1: 11463846-11464845 Brachypodium distachyon
Bradi1g14517 1.0kb downstream 1.0kb downstream 3189 true Bd1: 11460657-11463845 Brachypodium distachyon
Bradi1g14517 1.0kb downstream 1.0kb downstream 1000 false Bd1: 11460657-11461656 Brachypodium distachyon
Bradi1g14517 2.0kb upstream 2.0kb upstream 4189 true Bd1: 11461657-11465845 Brachypodium distachyon
Bradi1g14517 2.0kb upstream 2.0kb upstream 2000 false Bd1: 11463846-11465845 Brachypodium distachyon
Bradi1g14517 2.0kb downstream 2.0kb downstream 4189 true Bd1: 11459657-11463845 Brachypodium distachyon
Bradi1g14517 2.0kb downstream 2.0kb downstream 2000 false Bd1: 11459657-11461656 Brachypodium distachyon
Bradi1g14517 5.0kb upstream 5.0kb upstream 7189 true Bd1: 11461657-11468845 Brachypodium distachyon
Bradi1g14517 5.0kb upstream 5.0kb upstream 5000 false Bd1: 11463846-11468845 Brachypodium distachyon
Bradi1g14517 5.0kb downstream 5.0kb downstream 7189 true Bd1: 11456657-11463845 Brachypodium distachyon
Bradi1g14517 5.0kb downstream 5.0kb downstream 5000 false Bd1: 11456657-11461656 Brachypodium distachyon
Bradi1g14517 10.0kb upstream 10.0kb upstream 12189 true Bd1: 11461657-11473845 Brachypodium distachyon
Bradi1g14517 10.0kb upstream 10.0kb upstream 10000 false Bd1: 11463846-11473845 Brachypodium distachyon
Bradi1g14517 10.0kb downstream 10.0kb downstream 12189 true Bd1: 11451657-11463845 Brachypodium distachyon
Bradi1g14517 10.0kb downstream 10.0kb downstream 10000 false Bd1: 11451657-11461656 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583260 5269 Grass View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.873       Low
cufflinks 2.578        
cufflinks 3.441        
cufflinks 2.534        
cufflinks 3.993        
cufflinks 2.488        
cufflinks 2.765        
cufflinks 2.623        
cufflinks 2.533        
cufflinks 3.638        
cufflinks 3.681        
cufflinks 2.731        
cufflinks 3.021        
cufflinks 3.468        
cufflinks 2.662        
cufflinks 2.384        
cufflinks 3.144        
cufflinks 1.627       Low
cufflinks 2.213        
cufflinks 4.881       High
cufflinks 4.295       High
cufflinks 2.995        
cufflinks 2.891        
cufflinks 2.698        
cufflinks 3.11        
cufflinks 4.108        
cufflinks 4.629       High
cufflinks 4.554       High
cufflinks 4.29       High
cufflinks 3.652        

0 Strain