Gene : Bradi1g14960 B. distachyon v3.1
Defline:  (1 of 2) PTHR10202 - PRESENILIN Genomic Order:  1901
Name:  ? Bradi1g14960 Secondary Identifier:  ? PAC:32802062
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g14960 0.5kb upstream 0.5kb upstream 1787 true Bd1: 11941592-11943378 Brachypodium distachyon
Bradi1g14960 0.5kb upstream 0.5kb upstream 500 false Bd1: 11942879-11943378 Brachypodium distachyon
Bradi1g14960 0.5kb downstream 0.5kb downstream 1787 true Bd1: 11941092-11942878 Brachypodium distachyon
Bradi1g14960 0.5kb downstream 0.5kb downstream 500 false Bd1: 11941092-11941591 Brachypodium distachyon
Bradi1g14960 1.0kb upstream 1.0kb upstream 2287 true Bd1: 11941592-11943878 Brachypodium distachyon
Bradi1g14960 1.0kb upstream 1.0kb upstream 1000 false Bd1: 11942879-11943878 Brachypodium distachyon
Bradi1g14960 1.0kb downstream 1.0kb downstream 2287 true Bd1: 11940592-11942878 Brachypodium distachyon
Bradi1g14960 1.0kb downstream 1.0kb downstream 1000 false Bd1: 11940592-11941591 Brachypodium distachyon
Bradi1g14960 2.0kb upstream 2.0kb upstream 3287 true Bd1: 11941592-11944878 Brachypodium distachyon
Bradi1g14960 2.0kb upstream 2.0kb upstream 2000 false Bd1: 11942879-11944878 Brachypodium distachyon
Bradi1g14960 2.0kb downstream 2.0kb downstream 3287 true Bd1: 11939592-11942878 Brachypodium distachyon
Bradi1g14960 2.0kb downstream 2.0kb downstream 2000 false Bd1: 11939592-11941591 Brachypodium distachyon
Bradi1g14960 5.0kb upstream 5.0kb upstream 6287 true Bd1: 11941592-11947878 Brachypodium distachyon
Bradi1g14960 5.0kb upstream 5.0kb upstream 5000 false Bd1: 11942879-11947878 Brachypodium distachyon
Bradi1g14960 5.0kb downstream 5.0kb downstream 6287 true Bd1: 11936592-11942878 Brachypodium distachyon
Bradi1g14960 5.0kb downstream 5.0kb downstream 5000 false Bd1: 11936592-11941591 Brachypodium distachyon
Bradi1g14960 10.0kb upstream 10.0kb upstream 11287 true Bd1: 11941592-11952878 Brachypodium distachyon
Bradi1g14960 10.0kb upstream 10.0kb upstream 10000 false Bd1: 11942879-11952878 Brachypodium distachyon
Bradi1g14960 10.0kb downstream 10.0kb downstream 11287 true Bd1: 11931592-11942878 Brachypodium distachyon
Bradi1g14960 10.0kb downstream 10.0kb downstream 10000 false Bd1: 11931592-11941591 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573989 5269 Grass View MSA
122049657 5273 Angiosperm View MSA
121347498 5274 Embryophyte View MSA
123424512 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.869        
cufflinks 7.746        
cufflinks 10.007        
cufflinks 7.041        
cufflinks 5.103       Low
cufflinks 8.374        
cufflinks 8.341        
cufflinks 7.797        
cufflinks 7.029        
cufflinks 9.498        
cufflinks 10.604     High  
cufflinks 8.568        
cufflinks 7.609     High  
cufflinks 7.734     High  
cufflinks 5.196       Low
cufflinks 9.001        
cufflinks 8.281        
cufflinks 15.129     High High
cufflinks 8.877        
cufflinks 6.235       Low
cufflinks 13.094     High High
cufflinks 10.657     High  
cufflinks 7.369        
cufflinks 7.507        
cufflinks 6.597        
cufflinks 9.96        
cufflinks 7.845        
cufflinks 10.951     High  
cufflinks 10.121        
cufflinks 11.856     High High

0 Strain