Gene : Bradi1g15290 B. distachyon v3.1
Defline:  (1 of 1) PTHR21649//PTHR21649:SF8 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  1942
Name:  ? Bradi1g15290 Secondary Identifier:  ? PAC:32806732
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g15290 0.5kb upstream 0.5kb upstream 2107 true Bd1: 12229983-12232089 Brachypodium distachyon
Bradi1g15290 0.5kb upstream 0.5kb upstream 500 false Bd1: 12231590-12232089 Brachypodium distachyon
Bradi1g15290 0.5kb downstream 0.5kb downstream 2107 true Bd1: 12229483-12231589 Brachypodium distachyon
Bradi1g15290 0.5kb downstream 0.5kb downstream 500 false Bd1: 12229483-12229982 Brachypodium distachyon
Bradi1g15290 1.0kb upstream 1.0kb upstream 2607 true Bd1: 12229983-12232589 Brachypodium distachyon
Bradi1g15290 1.0kb upstream 1.0kb upstream 1000 false Bd1: 12231590-12232589 Brachypodium distachyon
Bradi1g15290 1.0kb downstream 1.0kb downstream 2607 true Bd1: 12228983-12231589 Brachypodium distachyon
Bradi1g15290 1.0kb downstream 1.0kb downstream 1000 false Bd1: 12228983-12229982 Brachypodium distachyon
Bradi1g15290 2.0kb upstream 2.0kb upstream 3607 true Bd1: 12229983-12233589 Brachypodium distachyon
Bradi1g15290 2.0kb upstream 2.0kb upstream 2000 false Bd1: 12231590-12233589 Brachypodium distachyon
Bradi1g15290 2.0kb downstream 2.0kb downstream 3607 true Bd1: 12227983-12231589 Brachypodium distachyon
Bradi1g15290 2.0kb downstream 2.0kb downstream 2000 false Bd1: 12227983-12229982 Brachypodium distachyon
Bradi1g15290 5.0kb upstream 5.0kb upstream 6607 true Bd1: 12229983-12236589 Brachypodium distachyon
Bradi1g15290 5.0kb upstream 5.0kb upstream 5000 false Bd1: 12231590-12236589 Brachypodium distachyon
Bradi1g15290 5.0kb downstream 5.0kb downstream 6607 true Bd1: 12224983-12231589 Brachypodium distachyon
Bradi1g15290 5.0kb downstream 5.0kb downstream 5000 false Bd1: 12224983-12229982 Brachypodium distachyon
Bradi1g15290 10.0kb upstream 10.0kb upstream 11607 true Bd1: 12229983-12241589 Brachypodium distachyon
Bradi1g15290 10.0kb upstream 10.0kb upstream 10000 false Bd1: 12231590-12241589 Brachypodium distachyon
Bradi1g15290 10.0kb downstream 10.0kb downstream 11607 true Bd1: 12219983-12231589 Brachypodium distachyon
Bradi1g15290 10.0kb downstream 10.0kb downstream 10000 false Bd1: 12219983-12229982 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
124568548 5269 Grass View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3251.588     High  
cufflinks 1891.286     High  
cufflinks 29.455     High Low
cufflinks 829.367     High  
cufflinks 3673.623     High  
cufflinks 4332.326     High  
cufflinks 4244.998     High  
cufflinks 4539.597     High  
cufflinks 4707.151     High  
cufflinks 2794.884     High  
cufflinks 4173.917     High  
cufflinks 3141.906     High  
cufflinks 5967.807     High  
cufflinks 7278.498     High High
cufflinks 3737.218     High  
cufflinks 3929.047     High  
cufflinks 4171.372     High  
cufflinks 38.078     High Low
cufflinks 1281.473     High  
cufflinks 1234.687     High  
cufflinks 1841.387     High  
cufflinks 2138.029     High  
cufflinks 4120.362     High  
cufflinks 4701.752     High  
cufflinks 4181.192     High  
cufflinks 29.865     High Low
cufflinks 5540.33     High  
cufflinks 145.369     High Low
cufflinks 974.025     High  
cufflinks 1377.435     High  

0 Strain