Gene : Bradi1g15590 B. distachyon v3.1
Defline:  (1 of 1) PTHR11214:SF5 - BETA-1,3-GALACTOSYLTRANSFERASE 2-RELATED Genomic Order:  1983
Name:  ? Bradi1g15590 Secondary Identifier:  ? PAC:32797810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g15590 0.5kb upstream 0.5kb upstream 6358 true Bd1: 12501353-12507710 Brachypodium distachyon
Bradi1g15590 0.5kb upstream 0.5kb upstream 500 false Bd1: 12501353-12501852 Brachypodium distachyon
Bradi1g15590 0.5kb downstream 0.5kb downstream 6358 true Bd1: 12501853-12508210 Brachypodium distachyon
Bradi1g15590 0.5kb downstream 0.5kb downstream 500 false Bd1: 12507711-12508210 Brachypodium distachyon
Bradi1g15590 1.0kb upstream 1.0kb upstream 6858 true Bd1: 12500853-12507710 Brachypodium distachyon
Bradi1g15590 1.0kb upstream 1.0kb upstream 1000 false Bd1: 12500853-12501852 Brachypodium distachyon
Bradi1g15590 1.0kb downstream 1.0kb downstream 6858 true Bd1: 12501853-12508710 Brachypodium distachyon
Bradi1g15590 1.0kb downstream 1.0kb downstream 1000 false Bd1: 12507711-12508710 Brachypodium distachyon
Bradi1g15590 2.0kb upstream 2.0kb upstream 7858 true Bd1: 12499853-12507710 Brachypodium distachyon
Bradi1g15590 2.0kb upstream 2.0kb upstream 2000 false Bd1: 12499853-12501852 Brachypodium distachyon
Bradi1g15590 2.0kb downstream 2.0kb downstream 7858 true Bd1: 12501853-12509710 Brachypodium distachyon
Bradi1g15590 2.0kb downstream 2.0kb downstream 2000 false Bd1: 12507711-12509710 Brachypodium distachyon
Bradi1g15590 5.0kb upstream 5.0kb upstream 10858 true Bd1: 12496853-12507710 Brachypodium distachyon
Bradi1g15590 5.0kb upstream 5.0kb upstream 5000 false Bd1: 12496853-12501852 Brachypodium distachyon
Bradi1g15590 5.0kb downstream 5.0kb downstream 10858 true Bd1: 12501853-12512710 Brachypodium distachyon
Bradi1g15590 5.0kb downstream 5.0kb downstream 5000 false Bd1: 12507711-12512710 Brachypodium distachyon
Bradi1g15590 10.0kb upstream 10.0kb upstream 15858 true Bd1: 12491853-12507710 Brachypodium distachyon
Bradi1g15590 10.0kb upstream 10.0kb upstream 10000 false Bd1: 12491853-12501852 Brachypodium distachyon
Bradi1g15590 10.0kb downstream 10.0kb downstream 15858 true Bd1: 12501853-12517710 Brachypodium distachyon
Bradi1g15590 10.0kb downstream 10.0kb downstream 10000 false Bd1: 12507711-12517710 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575692 5269 Grass View MSA
122042482 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.267       High
cufflinks 3.461        
cufflinks 4.176        
cufflinks 3.555        
cufflinks 5.922        
cufflinks 3.364        
cufflinks 2.984        
cufflinks 3.478        
cufflinks 3.559        
cufflinks 2.922        
cufflinks 0.792       Low
cufflinks 3.9        
cufflinks 1.723       Low
cufflinks 0.569       Low
cufflinks 6.281        
cufflinks 3.103        
cufflinks 3.744        
cufflinks 9.601       High
cufflinks 4.082        
cufflinks 1.478       Low
cufflinks 9.198       High
cufflinks 3.538        
cufflinks 3.965        
cufflinks 3.969        
cufflinks 3.242        
cufflinks 4.356        
cufflinks 1.9       Low
cufflinks 3.37        
cufflinks 3.632        
cufflinks 9.313       High

0 Strain