Gene : Bradi1g15540 B. distachyon v3.1
Defline:  (1 of 7) PF04484 - Family of unknown function (DUF566) (DUF566) Genomic Order:  1977
Name:  ? Bradi1g15540 Secondary Identifier:  ? PAC:32804658
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g15540 0.5kb upstream 0.5kb upstream 2633 true Bd1: 12467026-12469658 Brachypodium distachyon
Bradi1g15540 0.5kb upstream 0.5kb upstream 500 false Bd1: 12467026-12467525 Brachypodium distachyon
Bradi1g15540 0.5kb downstream 0.5kb downstream 2633 true Bd1: 12467526-12470158 Brachypodium distachyon
Bradi1g15540 0.5kb downstream 0.5kb downstream 500 false Bd1: 12469659-12470158 Brachypodium distachyon
Bradi1g15540 1.0kb upstream 1.0kb upstream 3133 true Bd1: 12466526-12469658 Brachypodium distachyon
Bradi1g15540 1.0kb upstream 1.0kb upstream 1000 false Bd1: 12466526-12467525 Brachypodium distachyon
Bradi1g15540 1.0kb downstream 1.0kb downstream 3133 true Bd1: 12467526-12470658 Brachypodium distachyon
Bradi1g15540 1.0kb downstream 1.0kb downstream 1000 false Bd1: 12469659-12470658 Brachypodium distachyon
Bradi1g15540 2.0kb upstream 2.0kb upstream 4133 true Bd1: 12465526-12469658 Brachypodium distachyon
Bradi1g15540 2.0kb upstream 2.0kb upstream 2000 false Bd1: 12465526-12467525 Brachypodium distachyon
Bradi1g15540 2.0kb downstream 2.0kb downstream 4133 true Bd1: 12467526-12471658 Brachypodium distachyon
Bradi1g15540 2.0kb downstream 2.0kb downstream 2000 false Bd1: 12469659-12471658 Brachypodium distachyon
Bradi1g15540 5.0kb upstream 5.0kb upstream 7133 true Bd1: 12462526-12469658 Brachypodium distachyon
Bradi1g15540 5.0kb upstream 5.0kb upstream 5000 false Bd1: 12462526-12467525 Brachypodium distachyon
Bradi1g15540 5.0kb downstream 5.0kb downstream 7133 true Bd1: 12467526-12474658 Brachypodium distachyon
Bradi1g15540 5.0kb downstream 5.0kb downstream 5000 false Bd1: 12469659-12474658 Brachypodium distachyon
Bradi1g15540 10.0kb upstream 10.0kb upstream 12133 true Bd1: 12457526-12469658 Brachypodium distachyon
Bradi1g15540 10.0kb upstream 10.0kb upstream 10000 false Bd1: 12457526-12467525 Brachypodium distachyon
Bradi1g15540 10.0kb downstream 10.0kb downstream 12133 true Bd1: 12467526-12479658 Brachypodium distachyon
Bradi1g15540 10.0kb downstream 10.0kb downstream 10000 false Bd1: 12469659-12479658 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026460 5273 Angiosperm View MSA
124578863 5269 Grass View MSA
121296342 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.008     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low High

0 Strain