Gene : Bradi1g15760 B. distachyon v3.1
Defline:  (1 of 1) PTHR12668:SF0 - UPF0136 MEMBRANE PROTEIN CG5532 Genomic Order:  2010
Name:  ? Bradi1g15760 Secondary Identifier:  ? PAC:32799560
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g15760 0.5kb upstream 0.5kb upstream 3594 true Bd1: 12710301-12713894 Brachypodium distachyon
Bradi1g15760 0.5kb upstream 0.5kb upstream 500 false Bd1: 12710301-12710800 Brachypodium distachyon
Bradi1g15760 0.5kb downstream 0.5kb downstream 3594 true Bd1: 12710801-12714394 Brachypodium distachyon
Bradi1g15760 0.5kb downstream 0.5kb downstream 500 false Bd1: 12713895-12714394 Brachypodium distachyon
Bradi1g15760 1.0kb upstream 1.0kb upstream 4094 true Bd1: 12709801-12713894 Brachypodium distachyon
Bradi1g15760 1.0kb upstream 1.0kb upstream 1000 false Bd1: 12709801-12710800 Brachypodium distachyon
Bradi1g15760 1.0kb downstream 1.0kb downstream 4094 true Bd1: 12710801-12714894 Brachypodium distachyon
Bradi1g15760 1.0kb downstream 1.0kb downstream 1000 false Bd1: 12713895-12714894 Brachypodium distachyon
Bradi1g15760 2.0kb upstream 2.0kb upstream 5094 true Bd1: 12708801-12713894 Brachypodium distachyon
Bradi1g15760 2.0kb upstream 2.0kb upstream 2000 false Bd1: 12708801-12710800 Brachypodium distachyon
Bradi1g15760 2.0kb downstream 2.0kb downstream 5094 true Bd1: 12710801-12715894 Brachypodium distachyon
Bradi1g15760 2.0kb downstream 2.0kb downstream 2000 false Bd1: 12713895-12715894 Brachypodium distachyon
Bradi1g15760 5.0kb upstream 5.0kb upstream 8094 true Bd1: 12705801-12713894 Brachypodium distachyon
Bradi1g15760 5.0kb upstream 5.0kb upstream 5000 false Bd1: 12705801-12710800 Brachypodium distachyon
Bradi1g15760 5.0kb downstream 5.0kb downstream 8094 true Bd1: 12710801-12718894 Brachypodium distachyon
Bradi1g15760 5.0kb downstream 5.0kb downstream 5000 false Bd1: 12713895-12718894 Brachypodium distachyon
Bradi1g15760 10.0kb upstream 10.0kb upstream 13094 true Bd1: 12700801-12713894 Brachypodium distachyon
Bradi1g15760 10.0kb upstream 10.0kb upstream 10000 false Bd1: 12700801-12710800 Brachypodium distachyon
Bradi1g15760 10.0kb downstream 10.0kb downstream 13094 true Bd1: 12710801-12723894 Brachypodium distachyon
Bradi1g15760 10.0kb downstream 10.0kb downstream 10000 false Bd1: 12713895-12723894 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586519 5269 Grass View MSA
122043738 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.971        
cufflinks 4.619        
cufflinks 3.946       Low
cufflinks 6.805        
cufflinks 7.427        
cufflinks 4.853        
cufflinks 5.279        
cufflinks 4.04       Low
cufflinks 5.357        
cufflinks 6.472        
cufflinks 4.477        
cufflinks 4.339        
cufflinks 3.474       Low
cufflinks 3.834       Low
cufflinks 4.76        
cufflinks 4.555        
cufflinks 7.476        
cufflinks 9.758        
cufflinks 14.122     High High
cufflinks 14.683     High High
cufflinks 17.377     High High
cufflinks 3.248       Low
cufflinks 5.036        
cufflinks 5.229        
cufflinks 6.785        
cufflinks 6.346        
cufflinks 4.386        
cufflinks 5.883        
cufflinks 4.852        
cufflinks 7.47        

0 Strain