Gene : Bradi1g15810 B. distachyon v3.1
Defline:  (1 of 1) K03027 - DNA-directed RNA polymerases I and III subunit RPAC1 (RPC40, POLR1C) Genomic Order:  2018
Name:  ? Bradi1g15810 Secondary Identifier:  ? PAC:32793038
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g15810 0.5kb upstream 0.5kb upstream 6869 true Bd1: 12762533-12769401 Brachypodium distachyon
Bradi1g15810 0.5kb upstream 0.5kb upstream 500 false Bd1: 12768902-12769401 Brachypodium distachyon
Bradi1g15810 0.5kb downstream 0.5kb downstream 6869 true Bd1: 12762033-12768901 Brachypodium distachyon
Bradi1g15810 0.5kb downstream 0.5kb downstream 500 false Bd1: 12762033-12762532 Brachypodium distachyon
Bradi1g15810 1.0kb upstream 1.0kb upstream 7369 true Bd1: 12762533-12769901 Brachypodium distachyon
Bradi1g15810 1.0kb upstream 1.0kb upstream 1000 false Bd1: 12768902-12769901 Brachypodium distachyon
Bradi1g15810 1.0kb downstream 1.0kb downstream 7369 true Bd1: 12761533-12768901 Brachypodium distachyon
Bradi1g15810 1.0kb downstream 1.0kb downstream 1000 false Bd1: 12761533-12762532 Brachypodium distachyon
Bradi1g15810 2.0kb upstream 2.0kb upstream 8369 true Bd1: 12762533-12770901 Brachypodium distachyon
Bradi1g15810 2.0kb upstream 2.0kb upstream 2000 false Bd1: 12768902-12770901 Brachypodium distachyon
Bradi1g15810 2.0kb downstream 2.0kb downstream 8369 true Bd1: 12760533-12768901 Brachypodium distachyon
Bradi1g15810 2.0kb downstream 2.0kb downstream 2000 false Bd1: 12760533-12762532 Brachypodium distachyon
Bradi1g15810 5.0kb upstream 5.0kb upstream 11369 true Bd1: 12762533-12773901 Brachypodium distachyon
Bradi1g15810 5.0kb upstream 5.0kb upstream 5000 false Bd1: 12768902-12773901 Brachypodium distachyon
Bradi1g15810 5.0kb downstream 5.0kb downstream 11369 true Bd1: 12757533-12768901 Brachypodium distachyon
Bradi1g15810 5.0kb downstream 5.0kb downstream 5000 false Bd1: 12757533-12762532 Brachypodium distachyon
Bradi1g15810 10.0kb upstream 10.0kb upstream 16369 true Bd1: 12762533-12778901 Brachypodium distachyon
Bradi1g15810 10.0kb upstream 10.0kb upstream 10000 false Bd1: 12768902-12778901 Brachypodium distachyon
Bradi1g15810 10.0kb downstream 10.0kb downstream 16369 true Bd1: 12752533-12768901 Brachypodium distachyon
Bradi1g15810 10.0kb downstream 10.0kb downstream 10000 false Bd1: 12752533-12762532 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573072 5269 Grass View MSA
122043698 5273 Angiosperm View MSA
121344052 5274 Embryophyte View MSA
123424148 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.286        
cufflinks 5.104        
cufflinks 4.455        
cufflinks 5.697       High
cufflinks 2.443        
cufflinks 4.456        
cufflinks 4.404        
cufflinks 3.629        
cufflinks 4.112        
cufflinks 2.908        
cufflinks 1.566       Low
cufflinks 3.116        
cufflinks 0.804       Low
cufflinks 1.195       Low
cufflinks 2.326        
cufflinks 3.941        
cufflinks 4.654        
cufflinks 6.407       High
cufflinks 2.562        
cufflinks 1.412       Low
cufflinks 4.248        
cufflinks 3.346        
cufflinks 3.195        
cufflinks 3.722        
cufflinks 4.836        
cufflinks 3.574        
cufflinks 1.146       Low
cufflinks 3.344        
cufflinks 3.097        
cufflinks 4.838        

0 Strain