Gene : Bradi1g11540 B. distachyon v3.1
Defline:  (1 of 2) PTHR24423//PTHR24423:SF515 - TWO-COMPONENT SENSOR HISTIDINE KINASE // SUBFAMILY NOT NAMED Genomic Order:  1452
Name:  ? Bradi1g11540 Secondary Identifier:  ? PAC:32798187
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g11540 0.5kb upstream 0.5kb upstream 5109 true Bd1: 8584980-8590088 Brachypodium distachyon
Bradi1g11540 0.5kb upstream 0.5kb upstream 500 false Bd1: 8584980-8585479 Brachypodium distachyon
Bradi1g11540 0.5kb downstream 0.5kb downstream 5109 true Bd1: 8585480-8590588 Brachypodium distachyon
Bradi1g11540 0.5kb downstream 0.5kb downstream 500 false Bd1: 8590089-8590588 Brachypodium distachyon
Bradi1g11540 1.0kb upstream 1.0kb upstream 5609 true Bd1: 8584480-8590088 Brachypodium distachyon
Bradi1g11540 1.0kb upstream 1.0kb upstream 1000 false Bd1: 8584480-8585479 Brachypodium distachyon
Bradi1g11540 1.0kb downstream 1.0kb downstream 5609 true Bd1: 8585480-8591088 Brachypodium distachyon
Bradi1g11540 1.0kb downstream 1.0kb downstream 1000 false Bd1: 8590089-8591088 Brachypodium distachyon
Bradi1g11540 2.0kb upstream 2.0kb upstream 6609 true Bd1: 8583480-8590088 Brachypodium distachyon
Bradi1g11540 2.0kb upstream 2.0kb upstream 2000 false Bd1: 8583480-8585479 Brachypodium distachyon
Bradi1g11540 2.0kb downstream 2.0kb downstream 6609 true Bd1: 8585480-8592088 Brachypodium distachyon
Bradi1g11540 2.0kb downstream 2.0kb downstream 2000 false Bd1: 8590089-8592088 Brachypodium distachyon
Bradi1g11540 5.0kb upstream 5.0kb upstream 9609 true Bd1: 8580480-8590088 Brachypodium distachyon
Bradi1g11540 5.0kb upstream 5.0kb upstream 5000 false Bd1: 8580480-8585479 Brachypodium distachyon
Bradi1g11540 5.0kb downstream 5.0kb downstream 9609 true Bd1: 8585480-8595088 Brachypodium distachyon
Bradi1g11540 5.0kb downstream 5.0kb downstream 5000 false Bd1: 8590089-8595088 Brachypodium distachyon
Bradi1g11540 10.0kb upstream 10.0kb upstream 14609 true Bd1: 8575480-8590088 Brachypodium distachyon
Bradi1g11540 10.0kb upstream 10.0kb upstream 10000 false Bd1: 8575480-8585479 Brachypodium distachyon
Bradi1g11540 10.0kb downstream 10.0kb downstream 14609 true Bd1: 8585480-8600088 Brachypodium distachyon
Bradi1g11540 10.0kb downstream 10.0kb downstream 10000 false Bd1: 8590089-8600088 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124588013 5269 Grass View MSA
122046437 5273 Angiosperm View MSA
123429048 5275 Viridiplantae View MSA
121350993 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.081        
cufflinks 3.533        
cufflinks 3.9        
cufflinks 2.835        
cufflinks 3.433        
cufflinks 3.172        
cufflinks 3.04        
cufflinks 3.473        
cufflinks 3.387        
cufflinks 2.869        
cufflinks 2.915        
cufflinks 4.169        
cufflinks 3.082        
cufflinks 2.248       Low
cufflinks 3.268        
cufflinks 3.496        
cufflinks 2.733        
cufflinks 5.879       High
cufflinks 4.538        
cufflinks 2.492        
cufflinks 5.186       High
cufflinks 3.887        
cufflinks 3.65        
cufflinks 3.164        
cufflinks 2.63        
cufflinks 3.616        
cufflinks 3.204        
cufflinks 3.313        
cufflinks 3.455        
cufflinks 6.213       High

0 Strain