Gene : Bradi1g11680 B. distachyon v3.1
Defline:  (1 of 2) PTHR11771//PTHR11771:SF49 - LIPOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  1466
Name:  ? Bradi1g11680 Secondary Identifier:  ? PAC:32793339
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g11680 0.5kb upstream 0.5kb upstream 4813 true Bd1: 8683382-8688194 Brachypodium distachyon
Bradi1g11680 0.5kb upstream 0.5kb upstream 500 false Bd1: 8687695-8688194 Brachypodium distachyon
Bradi1g11680 0.5kb downstream 0.5kb downstream 4813 true Bd1: 8682882-8687694 Brachypodium distachyon
Bradi1g11680 0.5kb downstream 0.5kb downstream 500 false Bd1: 8682882-8683381 Brachypodium distachyon
Bradi1g11680 1.0kb upstream 1.0kb upstream 5313 true Bd1: 8683382-8688694 Brachypodium distachyon
Bradi1g11680 1.0kb upstream 1.0kb upstream 1000 false Bd1: 8687695-8688694 Brachypodium distachyon
Bradi1g11680 1.0kb downstream 1.0kb downstream 5313 true Bd1: 8682382-8687694 Brachypodium distachyon
Bradi1g11680 1.0kb downstream 1.0kb downstream 1000 false Bd1: 8682382-8683381 Brachypodium distachyon
Bradi1g11680 2.0kb upstream 2.0kb upstream 6313 true Bd1: 8683382-8689694 Brachypodium distachyon
Bradi1g11680 2.0kb upstream 2.0kb upstream 2000 false Bd1: 8687695-8689694 Brachypodium distachyon
Bradi1g11680 2.0kb downstream 2.0kb downstream 6313 true Bd1: 8681382-8687694 Brachypodium distachyon
Bradi1g11680 2.0kb downstream 2.0kb downstream 2000 false Bd1: 8681382-8683381 Brachypodium distachyon
Bradi1g11680 5.0kb upstream 5.0kb upstream 9313 true Bd1: 8683382-8692694 Brachypodium distachyon
Bradi1g11680 5.0kb upstream 5.0kb upstream 5000 false Bd1: 8687695-8692694 Brachypodium distachyon
Bradi1g11680 5.0kb downstream 5.0kb downstream 9313 true Bd1: 8678382-8687694 Brachypodium distachyon
Bradi1g11680 5.0kb downstream 5.0kb downstream 5000 false Bd1: 8678382-8683381 Brachypodium distachyon
Bradi1g11680 10.0kb upstream 10.0kb upstream 14313 true Bd1: 8683382-8697694 Brachypodium distachyon
Bradi1g11680 10.0kb upstream 10.0kb upstream 10000 false Bd1: 8687695-8697694 Brachypodium distachyon
Bradi1g11680 10.0kb downstream 10.0kb downstream 14313 true Bd1: 8673382-8687694 Brachypodium distachyon
Bradi1g11680 10.0kb downstream 10.0kb downstream 10000 false Bd1: 8673382-8683381 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585684 5269 Grass View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 48.806     High  
cufflinks 38.18     High  
cufflinks 66.596     High  
cufflinks 37.057     High  
cufflinks 382.796     High High
cufflinks 39.103     High  
cufflinks 43.253     High  
cufflinks 51.679     High  
cufflinks 38.874     High  
cufflinks 22.268     High  
cufflinks 2.159       Low
cufflinks 49.912     High  
cufflinks 16.413     High  
cufflinks 0.847       Low
cufflinks 62.539     High  
cufflinks 29.985     High  
cufflinks 31.037     High  
cufflinks 47.089     High  
cufflinks 130.243     High High
cufflinks 46.167     High  
cufflinks 6.094       Low
cufflinks 40.634     High  
cufflinks 63.143     High  
cufflinks 42.056     High  
cufflinks 25.5     High  
cufflinks 52.129     High  
cufflinks 0.6       Low
cufflinks 47.461     High  
cufflinks 42.712     High  
cufflinks 113.966     High High

0 Strain