Gene : Bradi1g11670 B. distachyon v3.1
Defline:  (1 of 1) 1.13.11.12//1.13.11.58 - Linoleate 13S-lipoxygenase / Lipoxidase // Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Genomic Order:  1465
Name:  ? Bradi1g11670 Secondary Identifier:  ? PAC:32799871
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5409 Brachypodium distachyon pathologic  
Bdistachyon PWY-735 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g11670 0.5kb upstream 0.5kb upstream 6300 true Bd1: 8664982-8671281 Brachypodium distachyon
Bradi1g11670 0.5kb upstream 0.5kb upstream 500 false Bd1: 8670782-8671281 Brachypodium distachyon
Bradi1g11670 0.5kb downstream 0.5kb downstream 6300 true Bd1: 8664482-8670781 Brachypodium distachyon
Bradi1g11670 0.5kb downstream 0.5kb downstream 500 false Bd1: 8664482-8664981 Brachypodium distachyon
Bradi1g11670 1.0kb upstream 1.0kb upstream 6800 true Bd1: 8664982-8671781 Brachypodium distachyon
Bradi1g11670 1.0kb upstream 1.0kb upstream 1000 false Bd1: 8670782-8671781 Brachypodium distachyon
Bradi1g11670 1.0kb downstream 1.0kb downstream 6800 true Bd1: 8663982-8670781 Brachypodium distachyon
Bradi1g11670 1.0kb downstream 1.0kb downstream 1000 false Bd1: 8663982-8664981 Brachypodium distachyon
Bradi1g11670 2.0kb upstream 2.0kb upstream 7800 true Bd1: 8664982-8672781 Brachypodium distachyon
Bradi1g11670 2.0kb upstream 2.0kb upstream 2000 false Bd1: 8670782-8672781 Brachypodium distachyon
Bradi1g11670 2.0kb downstream 2.0kb downstream 7800 true Bd1: 8662982-8670781 Brachypodium distachyon
Bradi1g11670 2.0kb downstream 2.0kb downstream 2000 false Bd1: 8662982-8664981 Brachypodium distachyon
Bradi1g11670 5.0kb upstream 5.0kb upstream 10800 true Bd1: 8664982-8675781 Brachypodium distachyon
Bradi1g11670 5.0kb upstream 5.0kb upstream 5000 false Bd1: 8670782-8675781 Brachypodium distachyon
Bradi1g11670 5.0kb downstream 5.0kb downstream 10800 true Bd1: 8659982-8670781 Brachypodium distachyon
Bradi1g11670 5.0kb downstream 5.0kb downstream 5000 false Bd1: 8659982-8664981 Brachypodium distachyon
Bradi1g11670 10.0kb upstream 10.0kb upstream 15800 true Bd1: 8664982-8680781 Brachypodium distachyon
Bradi1g11670 10.0kb upstream 10.0kb upstream 10000 false Bd1: 8670782-8680781 Brachypodium distachyon
Bradi1g11670 10.0kb downstream 10.0kb downstream 15800 true Bd1: 8654982-8670781 Brachypodium distachyon
Bradi1g11670 10.0kb downstream 10.0kb downstream 10000 false Bd1: 8654982-8664981 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580816 5269 Grass View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.854     High  
cufflinks 19.843     High  
cufflinks 18.798     High  
cufflinks 17.067     High  
cufflinks 37.045     High High
cufflinks 18.337     High  
cufflinks 17.623     High  
cufflinks 18.905     High  
cufflinks 17.172     High  
cufflinks 6.471       Low
cufflinks 17.81     High  
cufflinks 29.786     High  
cufflinks 11.442     High  
cufflinks 8.309     High Low
cufflinks 28.623     High  
cufflinks 15.869     High  
cufflinks 11.544     High  
cufflinks 115.929     High High
cufflinks 35.139     High High
cufflinks 16.823     High  
cufflinks 20.585     High  
cufflinks 11.223     High  
cufflinks 19.602     High  
cufflinks 17.128     High  
cufflinks 14.617     High  
cufflinks 15.319     High  
cufflinks 15.647     High  
cufflinks 13.23     High  
cufflinks 11.46     High  
cufflinks 37.853     High High

0 Strain