Gene : Bradi1g11890 B. distachyon v3.1
Defline:  (1 of 1) PTHR37228:SF1 - RIBOSOMAL PROTEIN S21 FAMILY PROTEIN Genomic Order:  1495
Name:  ? Bradi1g11890 Secondary Identifier:  ? PAC:32802755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g11890 0.5kb upstream 0.5kb upstream 3576 true Bd1: 8837813-8841388 Brachypodium distachyon
Bradi1g11890 0.5kb upstream 0.5kb upstream 500 false Bd1: 8837813-8838312 Brachypodium distachyon
Bradi1g11890 0.5kb downstream 0.5kb downstream 3576 true Bd1: 8838313-8841888 Brachypodium distachyon
Bradi1g11890 0.5kb downstream 0.5kb downstream 500 false Bd1: 8841389-8841888 Brachypodium distachyon
Bradi1g11890 1.0kb upstream 1.0kb upstream 4076 true Bd1: 8837313-8841388 Brachypodium distachyon
Bradi1g11890 1.0kb upstream 1.0kb upstream 1000 false Bd1: 8837313-8838312 Brachypodium distachyon
Bradi1g11890 1.0kb downstream 1.0kb downstream 4076 true Bd1: 8838313-8842388 Brachypodium distachyon
Bradi1g11890 1.0kb downstream 1.0kb downstream 1000 false Bd1: 8841389-8842388 Brachypodium distachyon
Bradi1g11890 2.0kb upstream 2.0kb upstream 5076 true Bd1: 8836313-8841388 Brachypodium distachyon
Bradi1g11890 2.0kb upstream 2.0kb upstream 2000 false Bd1: 8836313-8838312 Brachypodium distachyon
Bradi1g11890 2.0kb downstream 2.0kb downstream 5076 true Bd1: 8838313-8843388 Brachypodium distachyon
Bradi1g11890 2.0kb downstream 2.0kb downstream 2000 false Bd1: 8841389-8843388 Brachypodium distachyon
Bradi1g11890 5.0kb upstream 5.0kb upstream 8076 true Bd1: 8833313-8841388 Brachypodium distachyon
Bradi1g11890 5.0kb upstream 5.0kb upstream 5000 false Bd1: 8833313-8838312 Brachypodium distachyon
Bradi1g11890 5.0kb downstream 5.0kb downstream 8076 true Bd1: 8838313-8846388 Brachypodium distachyon
Bradi1g11890 5.0kb downstream 5.0kb downstream 5000 false Bd1: 8841389-8846388 Brachypodium distachyon
Bradi1g11890 10.0kb upstream 10.0kb upstream 13076 true Bd1: 8828313-8841388 Brachypodium distachyon
Bradi1g11890 10.0kb upstream 10.0kb upstream 10000 false Bd1: 8828313-8838312 Brachypodium distachyon
Bradi1g11890 10.0kb downstream 10.0kb downstream 13076 true Bd1: 8838313-8851388 Brachypodium distachyon
Bradi1g11890 10.0kb downstream 10.0kb downstream 10000 false Bd1: 8841389-8851388 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570571 5269 Grass View MSA
122049752 5273 Angiosperm View MSA
121311575 5274 Embryophyte View MSA
123348853 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.914        
cufflinks 3.568        
cufflinks 2.679        
cufflinks 5.421       High
cufflinks 2.325        
cufflinks 2.219        
cufflinks 3.329        
cufflinks 1.913        
cufflinks 2.065        
cufflinks 3.036        
cufflinks 0.977       Low
cufflinks 1.426        
cufflinks 0.477       Low
cufflinks 0.721       Low
cufflinks 1.643        
cufflinks 3.188        
cufflinks 5.51       High
cufflinks 6.523       High
cufflinks 3.165        
cufflinks 2.67        
cufflinks 3.378        
cufflinks 1.649        
cufflinks 1.443        
cufflinks 2.014        
cufflinks 3.13        
cufflinks 3.876        
cufflinks 0.809       Low
cufflinks 2.657        
cufflinks 2.326        
cufflinks 2.439        

0 Strain