Gene : Bradi1g12117 B. distachyon v3.1
Defline:  (1 of 14) 3.6.3.6 - Proton-exporting ATPase / Proton-translocating P-type ATPase Genomic Order:  1525
Name:  ? Bradi1g12117 Secondary Identifier:  ? PAC:32805254
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g12117 0.5kb upstream 0.5kb upstream 8022 true Bd1: 9003204-9011225 Brachypodium distachyon
Bradi1g12117 0.5kb upstream 0.5kb upstream 500 false Bd1: 9010726-9011225 Brachypodium distachyon
Bradi1g12117 0.5kb downstream 0.5kb downstream 8022 true Bd1: 9002704-9010725 Brachypodium distachyon
Bradi1g12117 0.5kb downstream 0.5kb downstream 500 false Bd1: 9002704-9003203 Brachypodium distachyon
Bradi1g12117 1.0kb upstream 1.0kb upstream 8522 true Bd1: 9003204-9011725 Brachypodium distachyon
Bradi1g12117 1.0kb upstream 1.0kb upstream 1000 false Bd1: 9010726-9011725 Brachypodium distachyon
Bradi1g12117 1.0kb downstream 1.0kb downstream 8522 true Bd1: 9002204-9010725 Brachypodium distachyon
Bradi1g12117 1.0kb downstream 1.0kb downstream 1000 false Bd1: 9002204-9003203 Brachypodium distachyon
Bradi1g12117 2.0kb upstream 2.0kb upstream 9522 true Bd1: 9003204-9012725 Brachypodium distachyon
Bradi1g12117 2.0kb upstream 2.0kb upstream 2000 false Bd1: 9010726-9012725 Brachypodium distachyon
Bradi1g12117 2.0kb downstream 2.0kb downstream 9522 true Bd1: 9001204-9010725 Brachypodium distachyon
Bradi1g12117 2.0kb downstream 2.0kb downstream 2000 false Bd1: 9001204-9003203 Brachypodium distachyon
Bradi1g12117 5.0kb upstream 5.0kb upstream 12522 true Bd1: 9003204-9015725 Brachypodium distachyon
Bradi1g12117 5.0kb upstream 5.0kb upstream 5000 false Bd1: 9010726-9015725 Brachypodium distachyon
Bradi1g12117 5.0kb downstream 5.0kb downstream 12522 true Bd1: 8998204-9010725 Brachypodium distachyon
Bradi1g12117 5.0kb downstream 5.0kb downstream 5000 false Bd1: 8998204-9003203 Brachypodium distachyon
Bradi1g12117 10.0kb upstream 10.0kb upstream 17522 true Bd1: 9003204-9020725 Brachypodium distachyon
Bradi1g12117 10.0kb upstream 10.0kb upstream 10000 false Bd1: 9010726-9020725 Brachypodium distachyon
Bradi1g12117 10.0kb downstream 10.0kb downstream 17522 true Bd1: 8993204-9010725 Brachypodium distachyon
Bradi1g12117 10.0kb downstream 10.0kb downstream 10000 false Bd1: 8993204-9003203 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582256 5269 Grass View MSA
122044728 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.379       Low
cufflinks 5.134        
cufflinks 4.668        
cufflinks 3.795        
cufflinks 2.673        
cufflinks 2.967        
cufflinks 3.952        
cufflinks 2.334        
cufflinks 3.589        
cufflinks 2.631        
cufflinks 1.848        
cufflinks 2.757        
cufflinks 1.512       Low
cufflinks 0.914       Low
cufflinks 1.102       Low
cufflinks 1.919        
cufflinks 1.189       Low
cufflinks 3.08        
cufflinks 5.872        
cufflinks 13.526     High High
cufflinks 5.434        
cufflinks 4.424        
cufflinks 3.785        
cufflinks 2.626        
cufflinks 3.13        
cufflinks 4.099        
cufflinks 6.525       High
cufflinks 4.112        
cufflinks 4.423        
cufflinks 7.242       High

0 Strain