Gene : Bradi1g12140 B. distachyon v3.1
Defline:  (1 of 2) 2.7.4.24 - Diphosphoinositol-pentakisphosphate kinase / PP-IP(5) kinase Genomic Order:  1527
Name:  ? Bradi1g12140 Secondary Identifier:  ? PAC:32794986
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6369 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g12140 0.5kb upstream 0.5kb upstream 19854 true Bd1: 9038024-9057877 Brachypodium distachyon
Bradi1g12140 0.5kb upstream 0.5kb upstream 500 false Bd1: 9057378-9057877 Brachypodium distachyon
Bradi1g12140 0.5kb downstream 0.5kb downstream 19854 true Bd1: 9037524-9057377 Brachypodium distachyon
Bradi1g12140 0.5kb downstream 0.5kb downstream 500 false Bd1: 9037524-9038023 Brachypodium distachyon
Bradi1g12140 1.0kb upstream 1.0kb upstream 20354 true Bd1: 9038024-9058377 Brachypodium distachyon
Bradi1g12140 1.0kb upstream 1.0kb upstream 1000 false Bd1: 9057378-9058377 Brachypodium distachyon
Bradi1g12140 1.0kb downstream 1.0kb downstream 20354 true Bd1: 9037024-9057377 Brachypodium distachyon
Bradi1g12140 1.0kb downstream 1.0kb downstream 1000 false Bd1: 9037024-9038023 Brachypodium distachyon
Bradi1g12140 2.0kb upstream 2.0kb upstream 21354 true Bd1: 9038024-9059377 Brachypodium distachyon
Bradi1g12140 2.0kb upstream 2.0kb upstream 2000 false Bd1: 9057378-9059377 Brachypodium distachyon
Bradi1g12140 2.0kb downstream 2.0kb downstream 21354 true Bd1: 9036024-9057377 Brachypodium distachyon
Bradi1g12140 2.0kb downstream 2.0kb downstream 2000 false Bd1: 9036024-9038023 Brachypodium distachyon
Bradi1g12140 5.0kb upstream 5.0kb upstream 24354 true Bd1: 9038024-9062377 Brachypodium distachyon
Bradi1g12140 5.0kb upstream 5.0kb upstream 5000 false Bd1: 9057378-9062377 Brachypodium distachyon
Bradi1g12140 5.0kb downstream 5.0kb downstream 24354 true Bd1: 9033024-9057377 Brachypodium distachyon
Bradi1g12140 5.0kb downstream 5.0kb downstream 5000 false Bd1: 9033024-9038023 Brachypodium distachyon
Bradi1g12140 10.0kb upstream 10.0kb upstream 29354 true Bd1: 9038024-9067377 Brachypodium distachyon
Bradi1g12140 10.0kb upstream 10.0kb upstream 10000 false Bd1: 9057378-9067377 Brachypodium distachyon
Bradi1g12140 10.0kb downstream 10.0kb downstream 29354 true Bd1: 9028024-9057377 Brachypodium distachyon
Bradi1g12140 10.0kb downstream 10.0kb downstream 10000 false Bd1: 9028024-9038023 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569714 5269 Grass View MSA
122041984 5273 Angiosperm View MSA
121345196 5274 Embryophyte View MSA
123427581 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.159        
cufflinks 1.788        
cufflinks 2.623       High
cufflinks 1.388        
cufflinks 0.598       Low
cufflinks 1.945        
cufflinks 1.701        
cufflinks 1.279        
cufflinks 1.805        
cufflinks 1.451        
cufflinks 3.201       High
cufflinks 1.771        
cufflinks 2.63       High
cufflinks 2.711       High
cufflinks 1.372        
cufflinks 2.15        
cufflinks 0.968        
cufflinks 0.587       Low
cufflinks 0.925        
cufflinks 0.366       Low
cufflinks 0.558       Low
cufflinks 2.4        
cufflinks 1.421        
cufflinks 1.677        
cufflinks 1.64        
cufflinks 2.196        
cufflinks 3.513       High
cufflinks 2.419        
cufflinks 2.283        
cufflinks 0.753       Low

0 Strain