Gene : Bradi1g12250 B. distachyon v3.1
Defline:  (1 of 1) 2.1.1.230 - 23S rRNA (adenosine(1067)-2'-O)-methyltransferase / Thiostrepton-resistance methylase Genomic Order:  1541
Name:  ? Bradi1g12250 Secondary Identifier:  ? PAC:32805148
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g12250 0.5kb upstream 0.5kb upstream 8113 true Bd1: 9175297-9183409 Brachypodium distachyon
Bradi1g12250 0.5kb upstream 0.5kb upstream 500 false Bd1: 9182910-9183409 Brachypodium distachyon
Bradi1g12250 0.5kb downstream 0.5kb downstream 8113 true Bd1: 9174797-9182909 Brachypodium distachyon
Bradi1g12250 0.5kb downstream 0.5kb downstream 500 false Bd1: 9174797-9175296 Brachypodium distachyon
Bradi1g12250 1.0kb upstream 1.0kb upstream 8613 true Bd1: 9175297-9183909 Brachypodium distachyon
Bradi1g12250 1.0kb upstream 1.0kb upstream 1000 false Bd1: 9182910-9183909 Brachypodium distachyon
Bradi1g12250 1.0kb downstream 1.0kb downstream 8613 true Bd1: 9174297-9182909 Brachypodium distachyon
Bradi1g12250 1.0kb downstream 1.0kb downstream 1000 false Bd1: 9174297-9175296 Brachypodium distachyon
Bradi1g12250 2.0kb upstream 2.0kb upstream 9613 true Bd1: 9175297-9184909 Brachypodium distachyon
Bradi1g12250 2.0kb upstream 2.0kb upstream 2000 false Bd1: 9182910-9184909 Brachypodium distachyon
Bradi1g12250 2.0kb downstream 2.0kb downstream 9613 true Bd1: 9173297-9182909 Brachypodium distachyon
Bradi1g12250 2.0kb downstream 2.0kb downstream 2000 false Bd1: 9173297-9175296 Brachypodium distachyon
Bradi1g12250 5.0kb upstream 5.0kb upstream 12613 true Bd1: 9175297-9187909 Brachypodium distachyon
Bradi1g12250 5.0kb upstream 5.0kb upstream 5000 false Bd1: 9182910-9187909 Brachypodium distachyon
Bradi1g12250 5.0kb downstream 5.0kb downstream 12613 true Bd1: 9170297-9182909 Brachypodium distachyon
Bradi1g12250 5.0kb downstream 5.0kb downstream 5000 false Bd1: 9170297-9175296 Brachypodium distachyon
Bradi1g12250 10.0kb upstream 10.0kb upstream 17613 true Bd1: 9175297-9192909 Brachypodium distachyon
Bradi1g12250 10.0kb upstream 10.0kb upstream 10000 false Bd1: 9182910-9192909 Brachypodium distachyon
Bradi1g12250 10.0kb downstream 10.0kb downstream 17613 true Bd1: 9165297-9182909 Brachypodium distachyon
Bradi1g12250 10.0kb downstream 10.0kb downstream 10000 false Bd1: 9165297-9175296 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026352 5273 Angiosperm View MSA
124572545 5269 Grass View MSA
121345763 5274 Embryophyte View MSA
123427917 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.322        
cufflinks 0.777       High
cufflinks 0.523        
cufflinks 0.791       High
cufflinks 0.161       Low
cufflinks 0.543        
cufflinks 0.84       High
cufflinks 0.311        
cufflinks 0.345        
cufflinks 0.421        
cufflinks 0.307        
cufflinks 0.333        
cufflinks 0.196        
cufflinks 0.222        
cufflinks 0.185        
cufflinks 0.552        
cufflinks 0.39        
cufflinks 0.095     Low Low
cufflinks 0.367        
cufflinks 0.231        
cufflinks 0.381        
cufflinks 0.359        
cufflinks 0.191        
cufflinks 0.34        
cufflinks 0.574        
cufflinks 0.478        
cufflinks 0.095       Low
cufflinks 0.472        
cufflinks 0.435        
cufflinks 0.513        

0 Strain