Gene : Bradi1g12476 B. distachyon v3.1
Defline:  (1 of 4) PTHR31384:SF19 - AUXIN RESPONSE FACTOR 17 Genomic Order:  1570
Name:  ? Bradi1g12476 Secondary Identifier:  ? PAC:32799002
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g12476 0.5kb upstream 0.5kb upstream 2128 true Bd1: 9348119-9350246 Brachypodium distachyon
Bradi1g12476 0.5kb upstream 0.5kb upstream 500 false Bd1: 9348119-9348618 Brachypodium distachyon
Bradi1g12476 0.5kb downstream 0.5kb downstream 2128 true Bd1: 9348619-9350746 Brachypodium distachyon
Bradi1g12476 0.5kb downstream 0.5kb downstream 500 false Bd1: 9350247-9350746 Brachypodium distachyon
Bradi1g12476 1.0kb upstream 1.0kb upstream 2628 true Bd1: 9347619-9350246 Brachypodium distachyon
Bradi1g12476 1.0kb upstream 1.0kb upstream 1000 false Bd1: 9347619-9348618 Brachypodium distachyon
Bradi1g12476 1.0kb downstream 1.0kb downstream 2628 true Bd1: 9348619-9351246 Brachypodium distachyon
Bradi1g12476 1.0kb downstream 1.0kb downstream 1000 false Bd1: 9350247-9351246 Brachypodium distachyon
Bradi1g12476 2.0kb upstream 2.0kb upstream 3628 true Bd1: 9346619-9350246 Brachypodium distachyon
Bradi1g12476 2.0kb upstream 2.0kb upstream 2000 false Bd1: 9346619-9348618 Brachypodium distachyon
Bradi1g12476 2.0kb downstream 2.0kb downstream 3628 true Bd1: 9348619-9352246 Brachypodium distachyon
Bradi1g12476 2.0kb downstream 2.0kb downstream 2000 false Bd1: 9350247-9352246 Brachypodium distachyon
Bradi1g12476 5.0kb upstream 5.0kb upstream 6628 true Bd1: 9343619-9350246 Brachypodium distachyon
Bradi1g12476 5.0kb upstream 5.0kb upstream 5000 false Bd1: 9343619-9348618 Brachypodium distachyon
Bradi1g12476 5.0kb downstream 5.0kb downstream 6628 true Bd1: 9348619-9355246 Brachypodium distachyon
Bradi1g12476 5.0kb downstream 5.0kb downstream 5000 false Bd1: 9350247-9355246 Brachypodium distachyon
Bradi1g12476 10.0kb upstream 10.0kb upstream 11628 true Bd1: 9338619-9350246 Brachypodium distachyon
Bradi1g12476 10.0kb upstream 10.0kb upstream 10000 false Bd1: 9338619-9348618 Brachypodium distachyon
Bradi1g12476 10.0kb downstream 10.0kb downstream 11628 true Bd1: 9348619-9360246 Brachypodium distachyon
Bradi1g12476 10.0kb downstream 10.0kb downstream 10000 false Bd1: 9350247-9360246 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124546299 5269 Grass View MSA
122051660 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain