Gene : Bradi1g12640 B. distachyon v3.1
Genomic Order:  1591 Name:  ? Bradi1g12640
Secondary Identifier:  ? PAC:32805247
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g12640 0.5kb upstream 0.5kb upstream 1473 true Bd1: 9508842-9510314 Brachypodium distachyon
Bradi1g12640 0.5kb upstream 0.5kb upstream 500 false Bd1: 9509815-9510314 Brachypodium distachyon
Bradi1g12640 0.5kb downstream 0.5kb downstream 1473 true Bd1: 9508342-9509814 Brachypodium distachyon
Bradi1g12640 0.5kb downstream 0.5kb downstream 500 false Bd1: 9508342-9508841 Brachypodium distachyon
Bradi1g12640 1.0kb upstream 1.0kb upstream 1973 true Bd1: 9508842-9510814 Brachypodium distachyon
Bradi1g12640 1.0kb upstream 1.0kb upstream 1000 false Bd1: 9509815-9510814 Brachypodium distachyon
Bradi1g12640 1.0kb downstream 1.0kb downstream 1973 true Bd1: 9507842-9509814 Brachypodium distachyon
Bradi1g12640 1.0kb downstream 1.0kb downstream 1000 false Bd1: 9507842-9508841 Brachypodium distachyon
Bradi1g12640 2.0kb upstream 2.0kb upstream 2973 true Bd1: 9508842-9511814 Brachypodium distachyon
Bradi1g12640 2.0kb upstream 2.0kb upstream 2000 false Bd1: 9509815-9511814 Brachypodium distachyon
Bradi1g12640 2.0kb downstream 2.0kb downstream 2973 true Bd1: 9506842-9509814 Brachypodium distachyon
Bradi1g12640 2.0kb downstream 2.0kb downstream 2000 false Bd1: 9506842-9508841 Brachypodium distachyon
Bradi1g12640 5.0kb upstream 5.0kb upstream 5973 true Bd1: 9508842-9514814 Brachypodium distachyon
Bradi1g12640 5.0kb upstream 5.0kb upstream 5000 false Bd1: 9509815-9514814 Brachypodium distachyon
Bradi1g12640 5.0kb downstream 5.0kb downstream 5973 true Bd1: 9503842-9509814 Brachypodium distachyon
Bradi1g12640 5.0kb downstream 5.0kb downstream 5000 false Bd1: 9503842-9508841 Brachypodium distachyon
Bradi1g12640 10.0kb upstream 10.0kb upstream 10973 true Bd1: 9508842-9519814 Brachypodium distachyon
Bradi1g12640 10.0kb upstream 10.0kb upstream 10000 false Bd1: 9509815-9519814 Brachypodium distachyon
Bradi1g12640 10.0kb downstream 10.0kb downstream 10973 true Bd1: 9498842-9509814 Brachypodium distachyon
Bradi1g12640 10.0kb downstream 10.0kb downstream 10000 false Bd1: 9498842-9508841 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587243 5269 Grass View MSA
122049581 5273 Angiosperm View MSA
121311486 5274 Embryophyte View MSA
123348778 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.096        
cufflinks 0.013     Low Low
cufflinks 0.041     Low  
cufflinks 0.017     Low Low
cufflinks 0.315        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low Low
cufflinks 0.1        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.583        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.09        
cufflinks 0.102        
cufflinks 0.088     Low  
cufflinks 1.854       High
cufflinks 2.19       High
cufflinks 22.135     High High
cufflinks 0.138        
cufflinks 0.033     Low  
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.063     Low  
cufflinks 0.181        
cufflinks 0.144        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  

0 Strain