Gene : Bradi1g12940 B. distachyon v3.1
Genomic Order:  1634 Name:  ? Bradi1g12940
Secondary Identifier:  ? PAC:32802209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g12940 0.5kb upstream 0.5kb upstream 5828 true Bd1: 9802234-9808061 Brachypodium distachyon
Bradi1g12940 0.5kb upstream 0.5kb upstream 500 false Bd1: 9807562-9808061 Brachypodium distachyon
Bradi1g12940 0.5kb downstream 0.5kb downstream 5828 true Bd1: 9801734-9807561 Brachypodium distachyon
Bradi1g12940 0.5kb downstream 0.5kb downstream 500 false Bd1: 9801734-9802233 Brachypodium distachyon
Bradi1g12940 1.0kb upstream 1.0kb upstream 6328 true Bd1: 9802234-9808561 Brachypodium distachyon
Bradi1g12940 1.0kb upstream 1.0kb upstream 1000 false Bd1: 9807562-9808561 Brachypodium distachyon
Bradi1g12940 1.0kb downstream 1.0kb downstream 6328 true Bd1: 9801234-9807561 Brachypodium distachyon
Bradi1g12940 1.0kb downstream 1.0kb downstream 1000 false Bd1: 9801234-9802233 Brachypodium distachyon
Bradi1g12940 2.0kb upstream 2.0kb upstream 7328 true Bd1: 9802234-9809561 Brachypodium distachyon
Bradi1g12940 2.0kb upstream 2.0kb upstream 2000 false Bd1: 9807562-9809561 Brachypodium distachyon
Bradi1g12940 2.0kb downstream 2.0kb downstream 7328 true Bd1: 9800234-9807561 Brachypodium distachyon
Bradi1g12940 2.0kb downstream 2.0kb downstream 2000 false Bd1: 9800234-9802233 Brachypodium distachyon
Bradi1g12940 5.0kb upstream 5.0kb upstream 10328 true Bd1: 9802234-9812561 Brachypodium distachyon
Bradi1g12940 5.0kb upstream 5.0kb upstream 5000 false Bd1: 9807562-9812561 Brachypodium distachyon
Bradi1g12940 5.0kb downstream 5.0kb downstream 10328 true Bd1: 9797234-9807561 Brachypodium distachyon
Bradi1g12940 5.0kb downstream 5.0kb downstream 5000 false Bd1: 9797234-9802233 Brachypodium distachyon
Bradi1g12940 10.0kb upstream 10.0kb upstream 15328 true Bd1: 9802234-9817561 Brachypodium distachyon
Bradi1g12940 10.0kb upstream 10.0kb upstream 10000 false Bd1: 9807562-9817561 Brachypodium distachyon
Bradi1g12940 10.0kb downstream 10.0kb downstream 15328 true Bd1: 9792234-9807561 Brachypodium distachyon
Bradi1g12940 10.0kb downstream 10.0kb downstream 10000 false Bd1: 9792234-9802233 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026471 5273 Angiosperm View MSA
124578271 5269 Grass View MSA
121344910 5274 Embryophyte View MSA
123380127 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.927        
cufflinks 5.583        
cufflinks 5.09        
cufflinks 6.027        
cufflinks 5.367        
cufflinks 5.737        
cufflinks 5.706        
cufflinks 6.009        
cufflinks 6.552        
cufflinks 6.913        
cufflinks 6.284        
cufflinks 6.246        
cufflinks 5.306        
cufflinks 6.23        
cufflinks 6.598        
cufflinks 5.611        
cufflinks 7.423       High
cufflinks 6.291        
cufflinks 5.99        
cufflinks 2.903       Low
cufflinks 4.907       Low
cufflinks 5.831        
cufflinks 5.676        
cufflinks 5.569        
cufflinks 5.94        
cufflinks 6.03        
cufflinks 7.585       High
cufflinks 6.434        
cufflinks 5.838        
cufflinks 5.729        

0 Strain