Gene : Bradi1g13590 B. distachyon v3.1
Defline:  (1 of 1) K01081 - 5'-nucleotidase (E3.1.3.5) Genomic Order:  1718
Name:  ? Bradi1g13590 Secondary Identifier:  ? PAC:32799767
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5381 Brachypodium distachyon pathologic  
Bdistachyon PWY-5695 Brachypodium distachyon pathologic  
Bdistachyon PWY-6596 Brachypodium distachyon pathologic  
Bdistachyon PWY-6606 Brachypodium distachyon pathologic  
Bdistachyon PWY-6608 Brachypodium distachyon pathologic  
Bdistachyon PWY-7185 Brachypodium distachyon pathologic  
Bdistachyon SALVADEHYPOX-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g13590 0.5kb upstream 0.5kb upstream 5571 true Bd1: 10463002-10468572 Brachypodium distachyon
Bradi1g13590 0.5kb upstream 0.5kb upstream 500 false Bd1: 10468073-10468572 Brachypodium distachyon
Bradi1g13590 0.5kb downstream 0.5kb downstream 5571 true Bd1: 10462502-10468072 Brachypodium distachyon
Bradi1g13590 0.5kb downstream 0.5kb downstream 500 false Bd1: 10462502-10463001 Brachypodium distachyon
Bradi1g13590 1.0kb upstream 1.0kb upstream 6071 true Bd1: 10463002-10469072 Brachypodium distachyon
Bradi1g13590 1.0kb upstream 1.0kb upstream 1000 false Bd1: 10468073-10469072 Brachypodium distachyon
Bradi1g13590 1.0kb downstream 1.0kb downstream 6071 true Bd1: 10462002-10468072 Brachypodium distachyon
Bradi1g13590 1.0kb downstream 1.0kb downstream 1000 false Bd1: 10462002-10463001 Brachypodium distachyon
Bradi1g13590 2.0kb upstream 2.0kb upstream 7071 true Bd1: 10463002-10470072 Brachypodium distachyon
Bradi1g13590 2.0kb upstream 2.0kb upstream 2000 false Bd1: 10468073-10470072 Brachypodium distachyon
Bradi1g13590 2.0kb downstream 2.0kb downstream 7071 true Bd1: 10461002-10468072 Brachypodium distachyon
Bradi1g13590 2.0kb downstream 2.0kb downstream 2000 false Bd1: 10461002-10463001 Brachypodium distachyon
Bradi1g13590 5.0kb upstream 5.0kb upstream 10071 true Bd1: 10463002-10473072 Brachypodium distachyon
Bradi1g13590 5.0kb upstream 5.0kb upstream 5000 false Bd1: 10468073-10473072 Brachypodium distachyon
Bradi1g13590 5.0kb downstream 5.0kb downstream 10071 true Bd1: 10458002-10468072 Brachypodium distachyon
Bradi1g13590 5.0kb downstream 5.0kb downstream 5000 false Bd1: 10458002-10463001 Brachypodium distachyon
Bradi1g13590 10.0kb upstream 10.0kb upstream 15071 true Bd1: 10463002-10478072 Brachypodium distachyon
Bradi1g13590 10.0kb upstream 10.0kb upstream 10000 false Bd1: 10468073-10478072 Brachypodium distachyon
Bradi1g13590 10.0kb downstream 10.0kb downstream 15071 true Bd1: 10453002-10468072 Brachypodium distachyon
Bradi1g13590 10.0kb downstream 10.0kb downstream 10000 false Bd1: 10453002-10463001 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579936 5269 Grass View MSA
122047014 5273 Angiosperm View MSA
121348169 5274 Embryophyte View MSA
123380756 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.079        
cufflinks 2.187        
cufflinks 1.865        
cufflinks 2.27        
cufflinks 1.964        
cufflinks 2.116        
cufflinks 2.274        
cufflinks 1.868        
cufflinks 1.944        
cufflinks 1.681        
cufflinks 1.633        
cufflinks 1.919        
cufflinks 1.251       Low
cufflinks 1.493        
cufflinks 1.803        
cufflinks 2.309       High
cufflinks 2.372       High
cufflinks 1.768        
cufflinks 1.077       Low
cufflinks 0.733       Low
cufflinks 1.608        
cufflinks 1.786        
cufflinks 1.913        
cufflinks 2.213        
cufflinks 2.254        
cufflinks 1.835        
cufflinks 1.149       Low
cufflinks 1.502        
cufflinks 1.526        
cufflinks 2.04        

0 Strain