Gene : Bradi1g13520 B. distachyon v3.1
Defline:  (1 of 1) K14536 - ribosome assembly protein 1 (RIA1) Genomic Order:  1710
Name:  ? Bradi1g13520 Secondary Identifier:  ? PAC:32792681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g13520 0.5kb upstream 0.5kb upstream 8097 true Bd1: 10399059-10407155 Brachypodium distachyon
Bradi1g13520 0.5kb upstream 0.5kb upstream 500 false Bd1: 10406656-10407155 Brachypodium distachyon
Bradi1g13520 0.5kb downstream 0.5kb downstream 8097 true Bd1: 10398559-10406655 Brachypodium distachyon
Bradi1g13520 0.5kb downstream 0.5kb downstream 500 false Bd1: 10398559-10399058 Brachypodium distachyon
Bradi1g13520 1.0kb upstream 1.0kb upstream 8597 true Bd1: 10399059-10407655 Brachypodium distachyon
Bradi1g13520 1.0kb upstream 1.0kb upstream 1000 false Bd1: 10406656-10407655 Brachypodium distachyon
Bradi1g13520 1.0kb downstream 1.0kb downstream 8597 true Bd1: 10398059-10406655 Brachypodium distachyon
Bradi1g13520 1.0kb downstream 1.0kb downstream 1000 false Bd1: 10398059-10399058 Brachypodium distachyon
Bradi1g13520 2.0kb upstream 2.0kb upstream 9597 true Bd1: 10399059-10408655 Brachypodium distachyon
Bradi1g13520 2.0kb upstream 2.0kb upstream 2000 false Bd1: 10406656-10408655 Brachypodium distachyon
Bradi1g13520 2.0kb downstream 2.0kb downstream 9597 true Bd1: 10397059-10406655 Brachypodium distachyon
Bradi1g13520 2.0kb downstream 2.0kb downstream 2000 false Bd1: 10397059-10399058 Brachypodium distachyon
Bradi1g13520 5.0kb upstream 5.0kb upstream 12597 true Bd1: 10399059-10411655 Brachypodium distachyon
Bradi1g13520 5.0kb upstream 5.0kb upstream 5000 false Bd1: 10406656-10411655 Brachypodium distachyon
Bradi1g13520 5.0kb downstream 5.0kb downstream 12597 true Bd1: 10394059-10406655 Brachypodium distachyon
Bradi1g13520 5.0kb downstream 5.0kb downstream 5000 false Bd1: 10394059-10399058 Brachypodium distachyon
Bradi1g13520 10.0kb upstream 10.0kb upstream 17597 true Bd1: 10399059-10416655 Brachypodium distachyon
Bradi1g13520 10.0kb upstream 10.0kb upstream 10000 false Bd1: 10406656-10416655 Brachypodium distachyon
Bradi1g13520 10.0kb downstream 10.0kb downstream 17597 true Bd1: 10389059-10406655 Brachypodium distachyon
Bradi1g13520 10.0kb downstream 10.0kb downstream 10000 false Bd1: 10389059-10399058 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026464 5273 Angiosperm View MSA
124574676 5269 Grass View MSA
121346138 5274 Embryophyte View MSA
123424452 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.166        
cufflinks 2.846        
cufflinks 2.738        
cufflinks 2.278        
cufflinks 0.572       Low
cufflinks 2.445        
cufflinks 2.289        
cufflinks 1.689        
cufflinks 2.15        
cufflinks 1.355        
cufflinks 1.844        
cufflinks 2.577        
cufflinks 1.233        
cufflinks 0.941       Low
cufflinks 1.223        
cufflinks 2.535        
cufflinks 1.377        
cufflinks 3.596       High
cufflinks 1.34        
cufflinks 0.45       Low
cufflinks 2.198        
cufflinks 2.63        
cufflinks 1.727        
cufflinks 1.906        
cufflinks 1.907        
cufflinks 2.298        
cufflinks 2.11        
cufflinks 2.256        
cufflinks 2.247        
cufflinks 3.006        

0 Strain