Gene : Bradi1g18730 B. distachyon v3.1
Defline:  (1 of 2) PTHR10894:SF0 - NUCLEOLAR PROTEIN 56 Genomic Order:  2340
Name:  ? Bradi1g18730 Secondary Identifier:  ? PAC:32798077
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g18730 0.5kb upstream 0.5kb upstream 4028 true Bd1: 15011394-15015421 Brachypodium distachyon
Bradi1g18730 0.5kb upstream 0.5kb upstream 500 false Bd1: 15014922-15015421 Brachypodium distachyon
Bradi1g18730 0.5kb downstream 0.5kb downstream 4028 true Bd1: 15010894-15014921 Brachypodium distachyon
Bradi1g18730 0.5kb downstream 0.5kb downstream 500 false Bd1: 15010894-15011393 Brachypodium distachyon
Bradi1g18730 1.0kb upstream 1.0kb upstream 4528 true Bd1: 15011394-15015921 Brachypodium distachyon
Bradi1g18730 1.0kb upstream 1.0kb upstream 1000 false Bd1: 15014922-15015921 Brachypodium distachyon
Bradi1g18730 1.0kb downstream 1.0kb downstream 4528 true Bd1: 15010394-15014921 Brachypodium distachyon
Bradi1g18730 1.0kb downstream 1.0kb downstream 1000 false Bd1: 15010394-15011393 Brachypodium distachyon
Bradi1g18730 2.0kb upstream 2.0kb upstream 5528 true Bd1: 15011394-15016921 Brachypodium distachyon
Bradi1g18730 2.0kb upstream 2.0kb upstream 2000 false Bd1: 15014922-15016921 Brachypodium distachyon
Bradi1g18730 2.0kb downstream 2.0kb downstream 5528 true Bd1: 15009394-15014921 Brachypodium distachyon
Bradi1g18730 2.0kb downstream 2.0kb downstream 2000 false Bd1: 15009394-15011393 Brachypodium distachyon
Bradi1g18730 5.0kb upstream 5.0kb upstream 8528 true Bd1: 15011394-15019921 Brachypodium distachyon
Bradi1g18730 5.0kb upstream 5.0kb upstream 5000 false Bd1: 15014922-15019921 Brachypodium distachyon
Bradi1g18730 5.0kb downstream 5.0kb downstream 8528 true Bd1: 15006394-15014921 Brachypodium distachyon
Bradi1g18730 5.0kb downstream 5.0kb downstream 5000 false Bd1: 15006394-15011393 Brachypodium distachyon
Bradi1g18730 10.0kb upstream 10.0kb upstream 13528 true Bd1: 15011394-15024921 Brachypodium distachyon
Bradi1g18730 10.0kb upstream 10.0kb upstream 10000 false Bd1: 15014922-15024921 Brachypodium distachyon
Bradi1g18730 10.0kb downstream 10.0kb downstream 13528 true Bd1: 15001394-15014921 Brachypodium distachyon
Bradi1g18730 10.0kb downstream 10.0kb downstream 10000 false Bd1: 15001394-15011393 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545909 5269 Grass View MSA
122042292 5273 Angiosperm View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.267     High  
cufflinks 45.652     High  
cufflinks 39.413     High  
cufflinks 38.013     High  
cufflinks 17.419     High  
cufflinks 40.268     High  
cufflinks 38.117     High  
cufflinks 29.681     High  
cufflinks 34.594     High  
cufflinks 23.047     High  
cufflinks 6.565       Low
cufflinks 30.602     High  
cufflinks 3.82       Low
cufflinks 4.91       Low
cufflinks 11.653     High  
cufflinks 45.104     High  
cufflinks 34.308     High  
cufflinks 92.234     High High
cufflinks 31.839     High  
cufflinks 4.666       Low
cufflinks 34.706     High  
cufflinks 29.494     High  
cufflinks 24.764     High  
cufflinks 27.192     High  
cufflinks 38.464     High  
cufflinks 25.678     High  
cufflinks 5.705       Low
cufflinks 21.629     High  
cufflinks 22.183     High  
cufflinks 44.428     High  

0 Strain