Gene : Bradi1g18910 B. distachyon v3.1
Defline:  (1 of 1) PTHR10799:SF70 - CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1 Genomic Order:  2362
Name:  ? Bradi1g18910 Secondary Identifier:  ? PAC:32794142
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g18910 0.5kb upstream 0.5kb upstream 16806 true Bd1: 15138204-15155009 Brachypodium distachyon
Bradi1g18910 0.5kb upstream 0.5kb upstream 500 false Bd1: 15138204-15138703 Brachypodium distachyon
Bradi1g18910 0.5kb downstream 0.5kb downstream 16806 true Bd1: 15138704-15155509 Brachypodium distachyon
Bradi1g18910 0.5kb downstream 0.5kb downstream 500 false Bd1: 15155010-15155509 Brachypodium distachyon
Bradi1g18910 1.0kb upstream 1.0kb upstream 17306 true Bd1: 15137704-15155009 Brachypodium distachyon
Bradi1g18910 1.0kb upstream 1.0kb upstream 1000 false Bd1: 15137704-15138703 Brachypodium distachyon
Bradi1g18910 1.0kb downstream 1.0kb downstream 17306 true Bd1: 15138704-15156009 Brachypodium distachyon
Bradi1g18910 1.0kb downstream 1.0kb downstream 1000 false Bd1: 15155010-15156009 Brachypodium distachyon
Bradi1g18910 2.0kb upstream 2.0kb upstream 18306 true Bd1: 15136704-15155009 Brachypodium distachyon
Bradi1g18910 2.0kb upstream 2.0kb upstream 2000 false Bd1: 15136704-15138703 Brachypodium distachyon
Bradi1g18910 2.0kb downstream 2.0kb downstream 18306 true Bd1: 15138704-15157009 Brachypodium distachyon
Bradi1g18910 2.0kb downstream 2.0kb downstream 2000 false Bd1: 15155010-15157009 Brachypodium distachyon
Bradi1g18910 5.0kb upstream 5.0kb upstream 21306 true Bd1: 15133704-15155009 Brachypodium distachyon
Bradi1g18910 5.0kb upstream 5.0kb upstream 5000 false Bd1: 15133704-15138703 Brachypodium distachyon
Bradi1g18910 5.0kb downstream 5.0kb downstream 21306 true Bd1: 15138704-15160009 Brachypodium distachyon
Bradi1g18910 5.0kb downstream 5.0kb downstream 5000 false Bd1: 15155010-15160009 Brachypodium distachyon
Bradi1g18910 10.0kb upstream 10.0kb upstream 26306 true Bd1: 15128704-15155009 Brachypodium distachyon
Bradi1g18910 10.0kb upstream 10.0kb upstream 10000 false Bd1: 15128704-15138703 Brachypodium distachyon
Bradi1g18910 10.0kb downstream 10.0kb downstream 26306 true Bd1: 15138704-15165009 Brachypodium distachyon
Bradi1g18910 10.0kb downstream 10.0kb downstream 10000 false Bd1: 15155010-15165009 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582069 5269 Grass View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.42        
cufflinks 13.933     High High
cufflinks 8.793        
cufflinks 7.263        
cufflinks 2.275       Low
cufflinks 8.069        
cufflinks 14.941     High High
cufflinks 5.666        
cufflinks 7.189        
cufflinks 4.36        
cufflinks 7.593        
cufflinks 8.634        
cufflinks 6.322        
cufflinks 4.61        
cufflinks 4.246        
cufflinks 8.502        
cufflinks 3.195       Low
cufflinks 10.919       High
cufflinks 7.826        
cufflinks 2.025       Low
cufflinks 4.859        
cufflinks 9.71        
cufflinks 5.997        
cufflinks 5.578        
cufflinks 6.146        
cufflinks 7.354        
cufflinks 7.091        
cufflinks 7.089        
cufflinks 7.145        
cufflinks 8.625        

0 Strain