Gene : Bradi1g19340 B. distachyon v3.1
Defline:  (1 of 4) KOG3140 - Predicted membrane protein Genomic Order:  2418
Name:  ? Bradi1g19340 Secondary Identifier:  ? PAC:32793556
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g19340 0.5kb upstream 0.5kb upstream 5781 true Bd1: 15475400-15481180 Brachypodium distachyon
Bradi1g19340 0.5kb upstream 0.5kb upstream 500 false Bd1: 15480681-15481180 Brachypodium distachyon
Bradi1g19340 0.5kb downstream 0.5kb downstream 5781 true Bd1: 15474900-15480680 Brachypodium distachyon
Bradi1g19340 0.5kb downstream 0.5kb downstream 500 false Bd1: 15474900-15475399 Brachypodium distachyon
Bradi1g19340 1.0kb upstream 1.0kb upstream 6281 true Bd1: 15475400-15481680 Brachypodium distachyon
Bradi1g19340 1.0kb upstream 1.0kb upstream 1000 false Bd1: 15480681-15481680 Brachypodium distachyon
Bradi1g19340 1.0kb downstream 1.0kb downstream 6281 true Bd1: 15474400-15480680 Brachypodium distachyon
Bradi1g19340 1.0kb downstream 1.0kb downstream 1000 false Bd1: 15474400-15475399 Brachypodium distachyon
Bradi1g19340 2.0kb upstream 2.0kb upstream 7281 true Bd1: 15475400-15482680 Brachypodium distachyon
Bradi1g19340 2.0kb upstream 2.0kb upstream 2000 false Bd1: 15480681-15482680 Brachypodium distachyon
Bradi1g19340 2.0kb downstream 2.0kb downstream 7281 true Bd1: 15473400-15480680 Brachypodium distachyon
Bradi1g19340 2.0kb downstream 2.0kb downstream 2000 false Bd1: 15473400-15475399 Brachypodium distachyon
Bradi1g19340 5.0kb upstream 5.0kb upstream 10281 true Bd1: 15475400-15485680 Brachypodium distachyon
Bradi1g19340 5.0kb upstream 5.0kb upstream 5000 false Bd1: 15480681-15485680 Brachypodium distachyon
Bradi1g19340 5.0kb downstream 5.0kb downstream 10281 true Bd1: 15470400-15480680 Brachypodium distachyon
Bradi1g19340 5.0kb downstream 5.0kb downstream 5000 false Bd1: 15470400-15475399 Brachypodium distachyon
Bradi1g19340 10.0kb upstream 10.0kb upstream 15281 true Bd1: 15475400-15490680 Brachypodium distachyon
Bradi1g19340 10.0kb upstream 10.0kb upstream 10000 false Bd1: 15480681-15490680 Brachypodium distachyon
Bradi1g19340 10.0kb downstream 10.0kb downstream 15281 true Bd1: 15465400-15480680 Brachypodium distachyon
Bradi1g19340 10.0kb downstream 10.0kb downstream 10000 false Bd1: 15465400-15475399 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574353 5269 Grass View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.23     High  
cufflinks 12.062     High  
cufflinks 16.967     High  
cufflinks 12.388     High  
cufflinks 16.692     High  
cufflinks 10.702     High Low
cufflinks 11.23     High  
cufflinks 9.065       Low
cufflinks 10.451     High Low
cufflinks 15.256     High  
cufflinks 13.719     High  
cufflinks 11.365     High  
cufflinks 11.617     High  
cufflinks 11.439     High  
cufflinks 11.021     High  
cufflinks 11.467     High  
cufflinks 16.191     High  
cufflinks 14.095     High  
cufflinks 32.908     High High
cufflinks 18.189     High  
cufflinks 20.585     High High
cufflinks 13.614     High  
cufflinks 9.147       Low
cufflinks 10.433     High Low
cufflinks 11.16     High  
cufflinks 17.669     High  
cufflinks 12.078     High  
cufflinks 18.038     High  
cufflinks 14.789     High  
cufflinks 16.309     High  

0 Strain