Gene : Bradi1g19250 B. distachyon v3.1
Defline:  (1 of 3) PF03350 - Uncharacterized protein family, UPF0114 (UPF0114) Genomic Order:  2406
Name:  ? Bradi1g19250 Secondary Identifier:  ? PAC:32804720
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g19250 0.5kb upstream 0.5kb upstream 3864 true Bd1: 15423366-15427229 Brachypodium distachyon
Bradi1g19250 0.5kb upstream 0.5kb upstream 500 false Bd1: 15426730-15427229 Brachypodium distachyon
Bradi1g19250 0.5kb downstream 0.5kb downstream 3864 true Bd1: 15422866-15426729 Brachypodium distachyon
Bradi1g19250 0.5kb downstream 0.5kb downstream 500 false Bd1: 15422866-15423365 Brachypodium distachyon
Bradi1g19250 1.0kb upstream 1.0kb upstream 4364 true Bd1: 15423366-15427729 Brachypodium distachyon
Bradi1g19250 1.0kb upstream 1.0kb upstream 1000 false Bd1: 15426730-15427729 Brachypodium distachyon
Bradi1g19250 1.0kb downstream 1.0kb downstream 4364 true Bd1: 15422366-15426729 Brachypodium distachyon
Bradi1g19250 1.0kb downstream 1.0kb downstream 1000 false Bd1: 15422366-15423365 Brachypodium distachyon
Bradi1g19250 2.0kb upstream 2.0kb upstream 5364 true Bd1: 15423366-15428729 Brachypodium distachyon
Bradi1g19250 2.0kb upstream 2.0kb upstream 2000 false Bd1: 15426730-15428729 Brachypodium distachyon
Bradi1g19250 2.0kb downstream 2.0kb downstream 5364 true Bd1: 15421366-15426729 Brachypodium distachyon
Bradi1g19250 2.0kb downstream 2.0kb downstream 2000 false Bd1: 15421366-15423365 Brachypodium distachyon
Bradi1g19250 5.0kb upstream 5.0kb upstream 8364 true Bd1: 15423366-15431729 Brachypodium distachyon
Bradi1g19250 5.0kb upstream 5.0kb upstream 5000 false Bd1: 15426730-15431729 Brachypodium distachyon
Bradi1g19250 5.0kb downstream 5.0kb downstream 8364 true Bd1: 15418366-15426729 Brachypodium distachyon
Bradi1g19250 5.0kb downstream 5.0kb downstream 5000 false Bd1: 15418366-15423365 Brachypodium distachyon
Bradi1g19250 10.0kb upstream 10.0kb upstream 13364 true Bd1: 15423366-15436729 Brachypodium distachyon
Bradi1g19250 10.0kb upstream 10.0kb upstream 10000 false Bd1: 15426730-15436729 Brachypodium distachyon
Bradi1g19250 10.0kb downstream 10.0kb downstream 13364 true Bd1: 15413366-15426729 Brachypodium distachyon
Bradi1g19250 10.0kb downstream 10.0kb downstream 10000 false Bd1: 15413366-15423365 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577291 5269 Grass View MSA
122048009 5273 Angiosperm View MSA
121348495 5274 Embryophyte View MSA
123426050 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.945     High  
cufflinks 12.261     High  
cufflinks 12.648     High  
cufflinks 17.516     High  
cufflinks 47.977     High  
cufflinks 29.649     High  
cufflinks 18.33     High  
cufflinks 63.152     High  
cufflinks 49.453     High  
cufflinks 39.51     High  
cufflinks 58.43     High  
cufflinks 30.232     High  
cufflinks 50.278     High  
cufflinks 79.914     High High
cufflinks 61.459     High  
cufflinks 22.411     High  
cufflinks 66.542     High  
cufflinks 0.784       Low
cufflinks 34.176     High  
cufflinks 27.865     High  
cufflinks 20.245     High  
cufflinks 22.315     High  
cufflinks 59.406     High  
cufflinks 53.581     High  
cufflinks 33.677     High  
cufflinks 12.662     High  
cufflinks 72.388     High  
cufflinks 20.638     High  
cufflinks 28.642     High  
cufflinks 6.901       Low

0 Strain