Gene : Bradi1g19930 B. distachyon v3.1
Defline:  (1 of 1) PTHR12964 - NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT Genomic Order:  2491
Name:  ? Bradi1g19930 Secondary Identifier:  ? PAC:32792797
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-3781 Brachypodium distachyon pathologic  
Bdistachyon PWY-4302 Brachypodium distachyon pathologic  
Bdistachyon PWY-5083 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g19930 0.5kb upstream 0.5kb upstream 3518 true Bd1: 15971793-15975310 Brachypodium distachyon
Bradi1g19930 0.5kb upstream 0.5kb upstream 500 false Bd1: 15974811-15975310 Brachypodium distachyon
Bradi1g19930 0.5kb downstream 0.5kb downstream 3518 true Bd1: 15971293-15974810 Brachypodium distachyon
Bradi1g19930 0.5kb downstream 0.5kb downstream 500 false Bd1: 15971293-15971792 Brachypodium distachyon
Bradi1g19930 1.0kb upstream 1.0kb upstream 4018 true Bd1: 15971793-15975810 Brachypodium distachyon
Bradi1g19930 1.0kb upstream 1.0kb upstream 1000 false Bd1: 15974811-15975810 Brachypodium distachyon
Bradi1g19930 1.0kb downstream 1.0kb downstream 4018 true Bd1: 15970793-15974810 Brachypodium distachyon
Bradi1g19930 1.0kb downstream 1.0kb downstream 1000 false Bd1: 15970793-15971792 Brachypodium distachyon
Bradi1g19930 2.0kb upstream 2.0kb upstream 5018 true Bd1: 15971793-15976810 Brachypodium distachyon
Bradi1g19930 2.0kb upstream 2.0kb upstream 2000 false Bd1: 15974811-15976810 Brachypodium distachyon
Bradi1g19930 2.0kb downstream 2.0kb downstream 5018 true Bd1: 15969793-15974810 Brachypodium distachyon
Bradi1g19930 2.0kb downstream 2.0kb downstream 2000 false Bd1: 15969793-15971792 Brachypodium distachyon
Bradi1g19930 5.0kb upstream 5.0kb upstream 8018 true Bd1: 15971793-15979810 Brachypodium distachyon
Bradi1g19930 5.0kb upstream 5.0kb upstream 5000 false Bd1: 15974811-15979810 Brachypodium distachyon
Bradi1g19930 5.0kb downstream 5.0kb downstream 8018 true Bd1: 15966793-15974810 Brachypodium distachyon
Bradi1g19930 5.0kb downstream 5.0kb downstream 5000 false Bd1: 15966793-15971792 Brachypodium distachyon
Bradi1g19930 10.0kb upstream 10.0kb upstream 13018 true Bd1: 15971793-15984810 Brachypodium distachyon
Bradi1g19930 10.0kb upstream 10.0kb upstream 10000 false Bd1: 15974811-15984810 Brachypodium distachyon
Bradi1g19930 10.0kb downstream 10.0kb downstream 13018 true Bd1: 15961793-15974810 Brachypodium distachyon
Bradi1g19930 10.0kb downstream 10.0kb downstream 10000 false Bd1: 15961793-15971792 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041345 5273 Angiosperm View MSA
124583150 5269 Grass View MSA
121345950 5274 Embryophyte View MSA
123424820 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.176     High  
cufflinks 24.621     High  
cufflinks 26.194     High  
cufflinks 31.668     High  
cufflinks 32.869     High  
cufflinks 22.41     High  
cufflinks 24.282     High  
cufflinks 22.237     High  
cufflinks 21.325     High  
cufflinks 33.604     High  
cufflinks 14.236     High Low
cufflinks 20.698     High  
cufflinks 12.566     High Low
cufflinks 14.876     High Low
cufflinks 32.202     High  
cufflinks 21.16     High  
cufflinks 35.353     High  
cufflinks 32.725     High  
cufflinks 20.465     High  
cufflinks 23.922     High  
cufflinks 44.883     High High
cufflinks 22.621     High  
cufflinks 21.129     High  
cufflinks 21.745     High  
cufflinks 27.036     High  
cufflinks 33.189     High  
cufflinks 12.482     High Low
cufflinks 32.368     High  
cufflinks 29.976     High  
cufflinks 35.925     High  

0 Strain