Gene : Bradi1g20490 B. distachyon v3.1
Defline:  (1 of 1) PTHR12281:SF10 - DCN1-LIKE PROTEIN 1 Genomic Order:  2561
Name:  ? Bradi1g20490 Secondary Identifier:  ? PAC:32793534
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g20490 0.5kb upstream 0.5kb upstream 4622 true Bd1: 16392749-16397370 Brachypodium distachyon
Bradi1g20490 0.5kb upstream 0.5kb upstream 500 false Bd1: 16392749-16393248 Brachypodium distachyon
Bradi1g20490 0.5kb downstream 0.5kb downstream 4622 true Bd1: 16393249-16397870 Brachypodium distachyon
Bradi1g20490 0.5kb downstream 0.5kb downstream 500 false Bd1: 16397371-16397870 Brachypodium distachyon
Bradi1g20490 1.0kb upstream 1.0kb upstream 5122 true Bd1: 16392249-16397370 Brachypodium distachyon
Bradi1g20490 1.0kb upstream 1.0kb upstream 1000 false Bd1: 16392249-16393248 Brachypodium distachyon
Bradi1g20490 1.0kb downstream 1.0kb downstream 5122 true Bd1: 16393249-16398370 Brachypodium distachyon
Bradi1g20490 1.0kb downstream 1.0kb downstream 1000 false Bd1: 16397371-16398370 Brachypodium distachyon
Bradi1g20490 2.0kb upstream 2.0kb upstream 6122 true Bd1: 16391249-16397370 Brachypodium distachyon
Bradi1g20490 2.0kb upstream 2.0kb upstream 2000 false Bd1: 16391249-16393248 Brachypodium distachyon
Bradi1g20490 2.0kb downstream 2.0kb downstream 6122 true Bd1: 16393249-16399370 Brachypodium distachyon
Bradi1g20490 2.0kb downstream 2.0kb downstream 2000 false Bd1: 16397371-16399370 Brachypodium distachyon
Bradi1g20490 5.0kb upstream 5.0kb upstream 9122 true Bd1: 16388249-16397370 Brachypodium distachyon
Bradi1g20490 5.0kb upstream 5.0kb upstream 5000 false Bd1: 16388249-16393248 Brachypodium distachyon
Bradi1g20490 5.0kb downstream 5.0kb downstream 9122 true Bd1: 16393249-16402370 Brachypodium distachyon
Bradi1g20490 5.0kb downstream 5.0kb downstream 5000 false Bd1: 16397371-16402370 Brachypodium distachyon
Bradi1g20490 10.0kb upstream 10.0kb upstream 14122 true Bd1: 16383249-16397370 Brachypodium distachyon
Bradi1g20490 10.0kb upstream 10.0kb upstream 10000 false Bd1: 16383249-16393248 Brachypodium distachyon
Bradi1g20490 10.0kb downstream 10.0kb downstream 14122 true Bd1: 16393249-16407370 Brachypodium distachyon
Bradi1g20490 10.0kb downstream 10.0kb downstream 10000 false Bd1: 16397371-16407370 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571705 5269 Grass View MSA
122049788 5273 Angiosperm View MSA
121347984 5274 Embryophyte View MSA
123426015 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.937        
cufflinks 2.895        
cufflinks 3.839        
cufflinks 3.974        
cufflinks 3.332        
cufflinks 2.762        
cufflinks 2.707        
cufflinks 3.052        
cufflinks 2.928        
cufflinks 3.968        
cufflinks 2.532       Low
cufflinks 2.732        
cufflinks 2.217       Low
cufflinks 2.055       Low
cufflinks 2.628        
cufflinks 2.338       Low
cufflinks 3.928        
cufflinks 4.114        
cufflinks 4.117        
cufflinks 4.551        
cufflinks 7.122       High
cufflinks 3.402        
cufflinks 3.168        
cufflinks 3.079        
cufflinks 3.283        
cufflinks 4.653        
cufflinks 2.962        
cufflinks 4.201        
cufflinks 3.661        
cufflinks 4.776        

0 Strain