Gene : Bradi1g20630 B. distachyon v3.1
Defline:  (1 of 6) PF05664 - Plant family of unknown function (DUF810) (DUF810) Genomic Order:  2579
Name:  ? Bradi1g20630 Secondary Identifier:  ? PAC:32798653
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g20630 0.5kb upstream 0.5kb upstream 12739 true Bd1: 16510647-16523385 Brachypodium distachyon
Bradi1g20630 0.5kb upstream 0.5kb upstream 500 false Bd1: 16510647-16511146 Brachypodium distachyon
Bradi1g20630 0.5kb downstream 0.5kb downstream 12739 true Bd1: 16511147-16523885 Brachypodium distachyon
Bradi1g20630 0.5kb downstream 0.5kb downstream 500 false Bd1: 16523386-16523885 Brachypodium distachyon
Bradi1g20630 1.0kb upstream 1.0kb upstream 13239 true Bd1: 16510147-16523385 Brachypodium distachyon
Bradi1g20630 1.0kb upstream 1.0kb upstream 1000 false Bd1: 16510147-16511146 Brachypodium distachyon
Bradi1g20630 1.0kb downstream 1.0kb downstream 13239 true Bd1: 16511147-16524385 Brachypodium distachyon
Bradi1g20630 1.0kb downstream 1.0kb downstream 1000 false Bd1: 16523386-16524385 Brachypodium distachyon
Bradi1g20630 2.0kb upstream 2.0kb upstream 14239 true Bd1: 16509147-16523385 Brachypodium distachyon
Bradi1g20630 2.0kb upstream 2.0kb upstream 2000 false Bd1: 16509147-16511146 Brachypodium distachyon
Bradi1g20630 2.0kb downstream 2.0kb downstream 14239 true Bd1: 16511147-16525385 Brachypodium distachyon
Bradi1g20630 2.0kb downstream 2.0kb downstream 2000 false Bd1: 16523386-16525385 Brachypodium distachyon
Bradi1g20630 5.0kb upstream 5.0kb upstream 17239 true Bd1: 16506147-16523385 Brachypodium distachyon
Bradi1g20630 5.0kb upstream 5.0kb upstream 5000 false Bd1: 16506147-16511146 Brachypodium distachyon
Bradi1g20630 5.0kb downstream 5.0kb downstream 17239 true Bd1: 16511147-16528385 Brachypodium distachyon
Bradi1g20630 5.0kb downstream 5.0kb downstream 5000 false Bd1: 16523386-16528385 Brachypodium distachyon
Bradi1g20630 10.0kb upstream 10.0kb upstream 22239 true Bd1: 16501147-16523385 Brachypodium distachyon
Bradi1g20630 10.0kb upstream 10.0kb upstream 10000 false Bd1: 16501147-16511146 Brachypodium distachyon
Bradi1g20630 10.0kb downstream 10.0kb downstream 22239 true Bd1: 16511147-16533385 Brachypodium distachyon
Bradi1g20630 10.0kb downstream 10.0kb downstream 10000 false Bd1: 16523386-16533385 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572763 5269 Grass View MSA
122045218 5273 Angiosperm View MSA
121344209 5274 Embryophyte View MSA
123427931 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.454        
cufflinks 5.38        
cufflinks 4.964        
cufflinks 3.92        
cufflinks 1.381       Low
cufflinks 4.932        
cufflinks 4.279        
cufflinks 3.475        
cufflinks 4.65        
cufflinks 2.608        
cufflinks 2.696        
cufflinks 4.647        
cufflinks 2.135        
cufflinks 1.762       Low
cufflinks 2.437        
cufflinks 5.275        
cufflinks 2.798        
cufflinks 8.209       High
cufflinks 3.186        
cufflinks 0.719       Low
cufflinks 3.573        
cufflinks 5.269        
cufflinks 3.756        
cufflinks 3.809        
cufflinks 3.647        
cufflinks 4.295        
cufflinks 2.691        
cufflinks 3.995        
cufflinks 3.754        
cufflinks 5.547        

0 Strain