Gene : Bradi1g20620 B. distachyon v3.1
Defline:  (1 of 2) PTHR11702//PTHR11702:SF26 - DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED // DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2 Genomic Order:  2578
Name:  ? Bradi1g20620 Secondary Identifier:  ? PAC:32792627
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g20620 0.5kb upstream 0.5kb upstream 5716 true Bd1: 16501381-16507096 Brachypodium distachyon
Bradi1g20620 0.5kb upstream 0.5kb upstream 500 false Bd1: 16506597-16507096 Brachypodium distachyon
Bradi1g20620 0.5kb downstream 0.5kb downstream 5716 true Bd1: 16500881-16506596 Brachypodium distachyon
Bradi1g20620 0.5kb downstream 0.5kb downstream 500 false Bd1: 16500881-16501380 Brachypodium distachyon
Bradi1g20620 1.0kb upstream 1.0kb upstream 6216 true Bd1: 16501381-16507596 Brachypodium distachyon
Bradi1g20620 1.0kb upstream 1.0kb upstream 1000 false Bd1: 16506597-16507596 Brachypodium distachyon
Bradi1g20620 1.0kb downstream 1.0kb downstream 6216 true Bd1: 16500381-16506596 Brachypodium distachyon
Bradi1g20620 1.0kb downstream 1.0kb downstream 1000 false Bd1: 16500381-16501380 Brachypodium distachyon
Bradi1g20620 2.0kb upstream 2.0kb upstream 7216 true Bd1: 16501381-16508596 Brachypodium distachyon
Bradi1g20620 2.0kb upstream 2.0kb upstream 2000 false Bd1: 16506597-16508596 Brachypodium distachyon
Bradi1g20620 2.0kb downstream 2.0kb downstream 7216 true Bd1: 16499381-16506596 Brachypodium distachyon
Bradi1g20620 2.0kb downstream 2.0kb downstream 2000 false Bd1: 16499381-16501380 Brachypodium distachyon
Bradi1g20620 5.0kb upstream 5.0kb upstream 10216 true Bd1: 16501381-16511596 Brachypodium distachyon
Bradi1g20620 5.0kb upstream 5.0kb upstream 5000 false Bd1: 16506597-16511596 Brachypodium distachyon
Bradi1g20620 5.0kb downstream 5.0kb downstream 10216 true Bd1: 16496381-16506596 Brachypodium distachyon
Bradi1g20620 5.0kb downstream 5.0kb downstream 5000 false Bd1: 16496381-16501380 Brachypodium distachyon
Bradi1g20620 10.0kb upstream 10.0kb upstream 15216 true Bd1: 16501381-16516596 Brachypodium distachyon
Bradi1g20620 10.0kb upstream 10.0kb upstream 10000 false Bd1: 16506597-16516596 Brachypodium distachyon
Bradi1g20620 10.0kb downstream 10.0kb downstream 15216 true Bd1: 16491381-16506596 Brachypodium distachyon
Bradi1g20620 10.0kb downstream 10.0kb downstream 10000 false Bd1: 16491381-16501380 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589418 5269 Grass View MSA
122042867 5273 Angiosperm View MSA
121351223 5274 Embryophyte View MSA
123424708 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.442        
cufflinks 11.887     High  
cufflinks 11.294     High  
cufflinks 13.372     High  
cufflinks 9.807     High  
cufflinks 11.221     High  
cufflinks 10.846     High  
cufflinks 15.719     High  
cufflinks 12.017     High  
cufflinks 10.325        
cufflinks 8.129        
cufflinks 14.27     High  
cufflinks 4.699       Low
cufflinks 6.477       Low
cufflinks 11.794     High  
cufflinks 10.734     High  
cufflinks 12.05     High  
cufflinks 16.807     High High
cufflinks 9.34        
cufflinks 7.356       Low
cufflinks 13.206     High  
cufflinks 12.142     High  
cufflinks 16.937     High High
cufflinks 12.251     High  
cufflinks 12.386     High  
cufflinks 10.899     High  
cufflinks 6.624       Low
cufflinks 10.922     High  
cufflinks 11.523     High  
cufflinks 13.139     High  

0 Strain