Gene : Bradi1g16210 B. distachyon v3.1
Defline:  (1 of 1) KOG2962 - Prohibitin-related membrane protease subunits Genomic Order:  2066
Name:  ? Bradi1g16210 Secondary Identifier:  ? PAC:32791752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g16210 0.5kb upstream 0.5kb upstream 9355 true Bd1: 13154255-13163609 Brachypodium distachyon
Bradi1g16210 0.5kb upstream 0.5kb upstream 500 false Bd1: 13154255-13154754 Brachypodium distachyon
Bradi1g16210 0.5kb downstream 0.5kb downstream 9355 true Bd1: 13154755-13164109 Brachypodium distachyon
Bradi1g16210 0.5kb downstream 0.5kb downstream 500 false Bd1: 13163610-13164109 Brachypodium distachyon
Bradi1g16210 1.0kb upstream 1.0kb upstream 9855 true Bd1: 13153755-13163609 Brachypodium distachyon
Bradi1g16210 1.0kb upstream 1.0kb upstream 1000 false Bd1: 13153755-13154754 Brachypodium distachyon
Bradi1g16210 1.0kb downstream 1.0kb downstream 9855 true Bd1: 13154755-13164609 Brachypodium distachyon
Bradi1g16210 1.0kb downstream 1.0kb downstream 1000 false Bd1: 13163610-13164609 Brachypodium distachyon
Bradi1g16210 2.0kb upstream 2.0kb upstream 10855 true Bd1: 13152755-13163609 Brachypodium distachyon
Bradi1g16210 2.0kb upstream 2.0kb upstream 2000 false Bd1: 13152755-13154754 Brachypodium distachyon
Bradi1g16210 2.0kb downstream 2.0kb downstream 10855 true Bd1: 13154755-13165609 Brachypodium distachyon
Bradi1g16210 2.0kb downstream 2.0kb downstream 2000 false Bd1: 13163610-13165609 Brachypodium distachyon
Bradi1g16210 5.0kb upstream 5.0kb upstream 13855 true Bd1: 13149755-13163609 Brachypodium distachyon
Bradi1g16210 5.0kb upstream 5.0kb upstream 5000 false Bd1: 13149755-13154754 Brachypodium distachyon
Bradi1g16210 5.0kb downstream 5.0kb downstream 13855 true Bd1: 13154755-13168609 Brachypodium distachyon
Bradi1g16210 5.0kb downstream 5.0kb downstream 5000 false Bd1: 13163610-13168609 Brachypodium distachyon
Bradi1g16210 10.0kb upstream 10.0kb upstream 18855 true Bd1: 13144755-13163609 Brachypodium distachyon
Bradi1g16210 10.0kb upstream 10.0kb upstream 10000 false Bd1: 13144755-13154754 Brachypodium distachyon
Bradi1g16210 10.0kb downstream 10.0kb downstream 18855 true Bd1: 13154755-13173609 Brachypodium distachyon
Bradi1g16210 10.0kb downstream 10.0kb downstream 10000 false Bd1: 13163610-13173609 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568616 5269 Grass View MSA
122049377 5273 Angiosperm View MSA
121346622 5274 Embryophyte View MSA
123424219 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.48        
cufflinks 6.834        
cufflinks 6.352        
cufflinks 7.053        
cufflinks 6.781        
cufflinks 6.112        
cufflinks 6.508        
cufflinks 6.494        
cufflinks 6.484        
cufflinks 6.556        
cufflinks 7.166        
cufflinks 5.68       Low
cufflinks 5.384       Low
cufflinks 6.561        
cufflinks 5.873        
cufflinks 6.242        
cufflinks 7.47        
cufflinks 12.452     High High
cufflinks 9.371       High
cufflinks 9.772       High
cufflinks 10.132       High
cufflinks 6.188        
cufflinks 6.776        
cufflinks 6.436        
cufflinks 7.256        
cufflinks 7.896        
cufflinks 7.407        
cufflinks 6.814        
cufflinks 6.487        
cufflinks 7.465        

0 Strain