Gene : Bradi1g16700 B. distachyon v3.1
Defline:  (1 of 2) PTHR10602 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 Genomic Order:  2099
Name:  ? Bradi1g16700 Secondary Identifier:  ? PAC:32793385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g16700 0.5kb upstream 0.5kb upstream 3222 true Bd1: 13482843-13486064 Brachypodium distachyon
Bradi1g16700 0.5kb upstream 0.5kb upstream 500 false Bd1: 13482843-13483342 Brachypodium distachyon
Bradi1g16700 0.5kb downstream 0.5kb downstream 3222 true Bd1: 13483343-13486564 Brachypodium distachyon
Bradi1g16700 0.5kb downstream 0.5kb downstream 500 false Bd1: 13486065-13486564 Brachypodium distachyon
Bradi1g16700 1.0kb upstream 1.0kb upstream 3722 true Bd1: 13482343-13486064 Brachypodium distachyon
Bradi1g16700 1.0kb upstream 1.0kb upstream 1000 false Bd1: 13482343-13483342 Brachypodium distachyon
Bradi1g16700 1.0kb downstream 1.0kb downstream 3722 true Bd1: 13483343-13487064 Brachypodium distachyon
Bradi1g16700 1.0kb downstream 1.0kb downstream 1000 false Bd1: 13486065-13487064 Brachypodium distachyon
Bradi1g16700 2.0kb upstream 2.0kb upstream 4722 true Bd1: 13481343-13486064 Brachypodium distachyon
Bradi1g16700 2.0kb upstream 2.0kb upstream 2000 false Bd1: 13481343-13483342 Brachypodium distachyon
Bradi1g16700 2.0kb downstream 2.0kb downstream 4722 true Bd1: 13483343-13488064 Brachypodium distachyon
Bradi1g16700 2.0kb downstream 2.0kb downstream 2000 false Bd1: 13486065-13488064 Brachypodium distachyon
Bradi1g16700 5.0kb upstream 5.0kb upstream 7722 true Bd1: 13478343-13486064 Brachypodium distachyon
Bradi1g16700 5.0kb upstream 5.0kb upstream 5000 false Bd1: 13478343-13483342 Brachypodium distachyon
Bradi1g16700 5.0kb downstream 5.0kb downstream 7722 true Bd1: 13483343-13491064 Brachypodium distachyon
Bradi1g16700 5.0kb downstream 5.0kb downstream 5000 false Bd1: 13486065-13491064 Brachypodium distachyon
Bradi1g16700 10.0kb upstream 10.0kb upstream 12722 true Bd1: 13473343-13486064 Brachypodium distachyon
Bradi1g16700 10.0kb upstream 10.0kb upstream 10000 false Bd1: 13473343-13483342 Brachypodium distachyon
Bradi1g16700 10.0kb downstream 10.0kb downstream 12722 true Bd1: 13483343-13496064 Brachypodium distachyon
Bradi1g16700 10.0kb downstream 10.0kb downstream 10000 false Bd1: 13486065-13496064 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545338 5269 Grass View MSA
122043583 5273 Angiosperm View MSA
121345071 5274 Embryophyte View MSA
123424758 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.165     High  
cufflinks 15.611     High  
cufflinks 19.659     High  
cufflinks 15.8     High  
cufflinks 12.303     High  
cufflinks 13.83     High  
cufflinks 14.759     High  
cufflinks 11.896     High  
cufflinks 13.565     High  
cufflinks 15.421     High  
cufflinks 10.255     High  
cufflinks 11.652     High  
cufflinks 6.862       Low
cufflinks 8.426     High Low
cufflinks 10.166     High Low
cufflinks 13.1     High  
cufflinks 16.439     High  
cufflinks 22.655     High High
cufflinks 18.26     High  
cufflinks 8.462       Low
cufflinks 19.755     High  
cufflinks 15.403     High  
cufflinks 11.572     High  
cufflinks 11.373     High  
cufflinks 13.922     High  
cufflinks 19.898     High  
cufflinks 9.471     High Low
cufflinks 19.674     High  
cufflinks 17.109     High  
cufflinks 18.523     High  

0 Strain