Gene : Bradi1g17243 B. distachyon v3.1
Defline:  (1 of 2) 1.5.1.3 - Dihydrofolate reductase / Tetrahydrofolate dehydrogenase Genomic Order:  2146
Name:  ? Bradi1g17243 Secondary Identifier:  ? PAC:32793177
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-3841 Brachypodium distachyon pathologic  
Bdistachyon PWY-6612 Brachypodium distachyon pathologic  
Bdistachyon PWY-6614 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g17243 0.5kb upstream 0.5kb upstream 2732 true Bd1: 13812610-13815341 Brachypodium distachyon
Bradi1g17243 0.5kb upstream 0.5kb upstream 500 false Bd1: 13812610-13813109 Brachypodium distachyon
Bradi1g17243 0.5kb downstream 0.5kb downstream 2732 true Bd1: 13813110-13815841 Brachypodium distachyon
Bradi1g17243 0.5kb downstream 0.5kb downstream 500 false Bd1: 13815342-13815841 Brachypodium distachyon
Bradi1g17243 1.0kb upstream 1.0kb upstream 3232 true Bd1: 13812110-13815341 Brachypodium distachyon
Bradi1g17243 1.0kb upstream 1.0kb upstream 1000 false Bd1: 13812110-13813109 Brachypodium distachyon
Bradi1g17243 1.0kb downstream 1.0kb downstream 3232 true Bd1: 13813110-13816341 Brachypodium distachyon
Bradi1g17243 1.0kb downstream 1.0kb downstream 1000 false Bd1: 13815342-13816341 Brachypodium distachyon
Bradi1g17243 2.0kb upstream 2.0kb upstream 4232 true Bd1: 13811110-13815341 Brachypodium distachyon
Bradi1g17243 2.0kb upstream 2.0kb upstream 2000 false Bd1: 13811110-13813109 Brachypodium distachyon
Bradi1g17243 2.0kb downstream 2.0kb downstream 4232 true Bd1: 13813110-13817341 Brachypodium distachyon
Bradi1g17243 2.0kb downstream 2.0kb downstream 2000 false Bd1: 13815342-13817341 Brachypodium distachyon
Bradi1g17243 5.0kb upstream 5.0kb upstream 7232 true Bd1: 13808110-13815341 Brachypodium distachyon
Bradi1g17243 5.0kb upstream 5.0kb upstream 5000 false Bd1: 13808110-13813109 Brachypodium distachyon
Bradi1g17243 5.0kb downstream 5.0kb downstream 7232 true Bd1: 13813110-13820341 Brachypodium distachyon
Bradi1g17243 5.0kb downstream 5.0kb downstream 5000 false Bd1: 13815342-13820341 Brachypodium distachyon
Bradi1g17243 10.0kb upstream 10.0kb upstream 12232 true Bd1: 13803110-13815341 Brachypodium distachyon
Bradi1g17243 10.0kb upstream 10.0kb upstream 10000 false Bd1: 13803110-13813109 Brachypodium distachyon
Bradi1g17243 10.0kb downstream 10.0kb downstream 12232 true Bd1: 13813110-13825341 Brachypodium distachyon
Bradi1g17243 10.0kb downstream 10.0kb downstream 10000 false Bd1: 13815342-13825341 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578884 5269 Grass View MSA
122048467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348869 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.474     High  
cufflinks 9.42        
cufflinks 10.02        
cufflinks 14.004     High  
cufflinks 19.542     High  
cufflinks 10.44     High  
cufflinks 9.195        
cufflinks 14.338     High  
cufflinks 13.853     High  
cufflinks 15.51     High  
cufflinks 1.982       Low
cufflinks 15.718     High  
cufflinks 7.4     High  
cufflinks 0.855       Low
cufflinks 40.912     High High
cufflinks 9.254        
cufflinks 25.215     High  
cufflinks 14.066     High  
cufflinks 9.1        
cufflinks 4.267        
cufflinks 122.213     High High
cufflinks 7.931        
cufflinks 14.282     High  
cufflinks 16.4     High  
cufflinks 13.903     High  
cufflinks 10.613        
cufflinks 0.847       Low
cufflinks 8.614        
cufflinks 9.049        
cufflinks 52.559     High High

0 Strain