Gene : Bradi1g17390 B. distachyon v3.1
Defline:  (1 of 1) K14317 - nuclear pore complex protein Nup214 (NUP214, CAN) Genomic Order:  2163
Name:  ? Bradi1g17390 Secondary Identifier:  ? PAC:32792986
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g17390 0.5kb upstream 0.5kb upstream 12788 true Bd1: 13915728-13928515 Brachypodium distachyon
Bradi1g17390 0.5kb upstream 0.5kb upstream 500 false Bd1: 13915728-13916227 Brachypodium distachyon
Bradi1g17390 0.5kb downstream 0.5kb downstream 12788 true Bd1: 13916228-13929015 Brachypodium distachyon
Bradi1g17390 0.5kb downstream 0.5kb downstream 500 false Bd1: 13928516-13929015 Brachypodium distachyon
Bradi1g17390 1.0kb upstream 1.0kb upstream 13288 true Bd1: 13915228-13928515 Brachypodium distachyon
Bradi1g17390 1.0kb upstream 1.0kb upstream 1000 false Bd1: 13915228-13916227 Brachypodium distachyon
Bradi1g17390 1.0kb downstream 1.0kb downstream 13288 true Bd1: 13916228-13929515 Brachypodium distachyon
Bradi1g17390 1.0kb downstream 1.0kb downstream 1000 false Bd1: 13928516-13929515 Brachypodium distachyon
Bradi1g17390 2.0kb upstream 2.0kb upstream 14288 true Bd1: 13914228-13928515 Brachypodium distachyon
Bradi1g17390 2.0kb upstream 2.0kb upstream 2000 false Bd1: 13914228-13916227 Brachypodium distachyon
Bradi1g17390 2.0kb downstream 2.0kb downstream 14288 true Bd1: 13916228-13930515 Brachypodium distachyon
Bradi1g17390 2.0kb downstream 2.0kb downstream 2000 false Bd1: 13928516-13930515 Brachypodium distachyon
Bradi1g17390 5.0kb upstream 5.0kb upstream 17288 true Bd1: 13911228-13928515 Brachypodium distachyon
Bradi1g17390 5.0kb upstream 5.0kb upstream 5000 false Bd1: 13911228-13916227 Brachypodium distachyon
Bradi1g17390 5.0kb downstream 5.0kb downstream 17288 true Bd1: 13916228-13933515 Brachypodium distachyon
Bradi1g17390 5.0kb downstream 5.0kb downstream 5000 false Bd1: 13928516-13933515 Brachypodium distachyon
Bradi1g17390 10.0kb upstream 10.0kb upstream 22288 true Bd1: 13906228-13928515 Brachypodium distachyon
Bradi1g17390 10.0kb upstream 10.0kb upstream 10000 false Bd1: 13906228-13916227 Brachypodium distachyon
Bradi1g17390 10.0kb downstream 10.0kb downstream 22288 true Bd1: 13916228-13938515 Brachypodium distachyon
Bradi1g17390 10.0kb downstream 10.0kb downstream 10000 false Bd1: 13928516-13938515 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581571 5269 Grass View MSA
122042091 5273 Angiosperm View MSA
121347011 5274 Embryophyte View MSA
123424066 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.902        
cufflinks 4.963        
cufflinks 5.727        
cufflinks 3.19        
cufflinks 0.956       Low
cufflinks 4.929        
cufflinks 4.379        
cufflinks 4.581        
cufflinks 5.617        
cufflinks 2.33        
cufflinks 4.807        
cufflinks 5.054        
cufflinks 5.126        
cufflinks 3.193        
cufflinks 2.184        
cufflinks 4.84        
cufflinks 1.666       Low
cufflinks 5.806        
cufflinks 2.034        
cufflinks 0.953       Low
cufflinks 2.093        
cufflinks 6.066       High
cufflinks 4.243        
cufflinks 3.786        
cufflinks 3.481        
cufflinks 4.457        
cufflinks 4.334        
cufflinks 4.16        
cufflinks 4.541        
cufflinks 4.503        

0 Strain