Gene : Bradi1g17470 B. distachyon v3.1
Defline:  (1 of 6) PF14200 - Ricin-type beta-trefoil lectin domain-like (RicinB_lectin_2) Genomic Order:  2172
Name:  ? Bradi1g17470 Secondary Identifier:  ? PAC:32798853
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g17470 0.5kb upstream 0.5kb upstream 3056 true Bd1: 13998826-14001881 Brachypodium distachyon
Bradi1g17470 0.5kb upstream 0.5kb upstream 500 false Bd1: 14001382-14001881 Brachypodium distachyon
Bradi1g17470 0.5kb downstream 0.5kb downstream 3056 true Bd1: 13998326-14001381 Brachypodium distachyon
Bradi1g17470 0.5kb downstream 0.5kb downstream 500 false Bd1: 13998326-13998825 Brachypodium distachyon
Bradi1g17470 1.0kb upstream 1.0kb upstream 3556 true Bd1: 13998826-14002381 Brachypodium distachyon
Bradi1g17470 1.0kb upstream 1.0kb upstream 1000 false Bd1: 14001382-14002381 Brachypodium distachyon
Bradi1g17470 1.0kb downstream 1.0kb downstream 3556 true Bd1: 13997826-14001381 Brachypodium distachyon
Bradi1g17470 1.0kb downstream 1.0kb downstream 1000 false Bd1: 13997826-13998825 Brachypodium distachyon
Bradi1g17470 2.0kb upstream 2.0kb upstream 4556 true Bd1: 13998826-14003381 Brachypodium distachyon
Bradi1g17470 2.0kb upstream 2.0kb upstream 2000 false Bd1: 14001382-14003381 Brachypodium distachyon
Bradi1g17470 2.0kb downstream 2.0kb downstream 4556 true Bd1: 13996826-14001381 Brachypodium distachyon
Bradi1g17470 2.0kb downstream 2.0kb downstream 2000 false Bd1: 13996826-13998825 Brachypodium distachyon
Bradi1g17470 5.0kb upstream 5.0kb upstream 7556 true Bd1: 13998826-14006381 Brachypodium distachyon
Bradi1g17470 5.0kb upstream 5.0kb upstream 5000 false Bd1: 14001382-14006381 Brachypodium distachyon
Bradi1g17470 5.0kb downstream 5.0kb downstream 7556 true Bd1: 13993826-14001381 Brachypodium distachyon
Bradi1g17470 5.0kb downstream 5.0kb downstream 5000 false Bd1: 13993826-13998825 Brachypodium distachyon
Bradi1g17470 10.0kb upstream 10.0kb upstream 12556 true Bd1: 13998826-14011381 Brachypodium distachyon
Bradi1g17470 10.0kb upstream 10.0kb upstream 10000 false Bd1: 14001382-14011381 Brachypodium distachyon
Bradi1g17470 10.0kb downstream 10.0kb downstream 12556 true Bd1: 13988826-14001381 Brachypodium distachyon
Bradi1g17470 10.0kb downstream 10.0kb downstream 10000 false Bd1: 13988826-13998825 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573741 5269 Grass View MSA
122049376 5273 Angiosperm View MSA
121349071 5274 Embryophyte View MSA
123381151 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.235        
cufflinks 0.5       Low
cufflinks 1.033        
cufflinks 0.622        
cufflinks 0.856        
cufflinks 0.534        
cufflinks 0.72        
cufflinks 0.77        
cufflinks 0.7        
cufflinks 0.854        
cufflinks 0.472       Low
cufflinks 0.699        
cufflinks 0.796        
cufflinks 0.215       Low
cufflinks 1.271        
cufflinks 0.507       Low
cufflinks 1.147        
cufflinks 2.109       High
cufflinks 2.182       High
cufflinks 4.266       High
cufflinks 2.29       High
cufflinks 0.578        
cufflinks 0.742        
cufflinks 0.684        
cufflinks 0.75        
cufflinks 0.973        
cufflinks 0.962        
cufflinks 0.995        
cufflinks 0.845        
cufflinks 2.641       High

0 Strain