Gene : Bradi1g17710 B. distachyon v3.1
Defline:  (1 of 1) PTHR12696 - TIP120 Genomic Order:  2205
Name:  ? Bradi1g17710 Secondary Identifier:  ? PAC:32798935
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g17710 0.5kb upstream 0.5kb upstream 11422 true Bd1: 14293413-14304834 Brachypodium distachyon
Bradi1g17710 0.5kb upstream 0.5kb upstream 500 false Bd1: 14293413-14293912 Brachypodium distachyon
Bradi1g17710 0.5kb downstream 0.5kb downstream 11422 true Bd1: 14293913-14305334 Brachypodium distachyon
Bradi1g17710 0.5kb downstream 0.5kb downstream 500 false Bd1: 14304835-14305334 Brachypodium distachyon
Bradi1g17710 1.0kb upstream 1.0kb upstream 11922 true Bd1: 14292913-14304834 Brachypodium distachyon
Bradi1g17710 1.0kb upstream 1.0kb upstream 1000 false Bd1: 14292913-14293912 Brachypodium distachyon
Bradi1g17710 1.0kb downstream 1.0kb downstream 11922 true Bd1: 14293913-14305834 Brachypodium distachyon
Bradi1g17710 1.0kb downstream 1.0kb downstream 1000 false Bd1: 14304835-14305834 Brachypodium distachyon
Bradi1g17710 2.0kb upstream 2.0kb upstream 12922 true Bd1: 14291913-14304834 Brachypodium distachyon
Bradi1g17710 2.0kb upstream 2.0kb upstream 2000 false Bd1: 14291913-14293912 Brachypodium distachyon
Bradi1g17710 2.0kb downstream 2.0kb downstream 12922 true Bd1: 14293913-14306834 Brachypodium distachyon
Bradi1g17710 2.0kb downstream 2.0kb downstream 2000 false Bd1: 14304835-14306834 Brachypodium distachyon
Bradi1g17710 5.0kb upstream 5.0kb upstream 15922 true Bd1: 14288913-14304834 Brachypodium distachyon
Bradi1g17710 5.0kb upstream 5.0kb upstream 5000 false Bd1: 14288913-14293912 Brachypodium distachyon
Bradi1g17710 5.0kb downstream 5.0kb downstream 15922 true Bd1: 14293913-14309834 Brachypodium distachyon
Bradi1g17710 5.0kb downstream 5.0kb downstream 5000 false Bd1: 14304835-14309834 Brachypodium distachyon
Bradi1g17710 10.0kb upstream 10.0kb upstream 20922 true Bd1: 14283913-14304834 Brachypodium distachyon
Bradi1g17710 10.0kb upstream 10.0kb upstream 10000 false Bd1: 14283913-14293912 Brachypodium distachyon
Bradi1g17710 10.0kb downstream 10.0kb downstream 20922 true Bd1: 14293913-14314834 Brachypodium distachyon
Bradi1g17710 10.0kb downstream 10.0kb downstream 10000 false Bd1: 14304835-14314834 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570091 5269 Grass View MSA
122049783 5273 Angiosperm View MSA
121344585 5274 Embryophyte View MSA
123423876 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.302        
cufflinks 8.988       High
cufflinks 8.121        
cufflinks 6.818        
cufflinks 2.443       Low
cufflinks 7.816        
cufflinks 7.247        
cufflinks 5.577        
cufflinks 7.04        
cufflinks 3.368        
cufflinks 4.817        
cufflinks 6.744        
cufflinks 3.635        
cufflinks 3.206        
cufflinks 2.878       Low
cufflinks 7.462        
cufflinks 4.046        
cufflinks 13.033     High High
cufflinks 7.023        
cufflinks 2.558       Low
cufflinks 5.345        
cufflinks 6.974        
cufflinks 5.555        
cufflinks 5.661        
cufflinks 6.194        
cufflinks 6.205        
cufflinks 4.801        
cufflinks 5.927        
cufflinks 5.657        
cufflinks 7.584        

0 Strain