Gene : Bradi1g24250 B. distachyon v3.1
Defline:  (1 of 1) PTHR33510:SF6 - PROTEIN TIC 20-I, CHLOROPLASTIC Genomic Order:  3044
Name:  ? Bradi1g24250 Secondary Identifier:  ? PAC:32796148
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g24250 0.5kb upstream 0.5kb upstream 3865 true Bd1: 19487056-19490920 Brachypodium distachyon
Bradi1g24250 0.5kb upstream 0.5kb upstream 500 false Bd1: 19487056-19487555 Brachypodium distachyon
Bradi1g24250 0.5kb downstream 0.5kb downstream 3865 true Bd1: 19487556-19491420 Brachypodium distachyon
Bradi1g24250 0.5kb downstream 0.5kb downstream 500 false Bd1: 19490921-19491420 Brachypodium distachyon
Bradi1g24250 1.0kb upstream 1.0kb upstream 4365 true Bd1: 19486556-19490920 Brachypodium distachyon
Bradi1g24250 1.0kb upstream 1.0kb upstream 1000 false Bd1: 19486556-19487555 Brachypodium distachyon
Bradi1g24250 1.0kb downstream 1.0kb downstream 4365 true Bd1: 19487556-19491920 Brachypodium distachyon
Bradi1g24250 1.0kb downstream 1.0kb downstream 1000 false Bd1: 19490921-19491920 Brachypodium distachyon
Bradi1g24250 2.0kb upstream 2.0kb upstream 5365 true Bd1: 19485556-19490920 Brachypodium distachyon
Bradi1g24250 2.0kb upstream 2.0kb upstream 2000 false Bd1: 19485556-19487555 Brachypodium distachyon
Bradi1g24250 2.0kb downstream 2.0kb downstream 5365 true Bd1: 19487556-19492920 Brachypodium distachyon
Bradi1g24250 2.0kb downstream 2.0kb downstream 2000 false Bd1: 19490921-19492920 Brachypodium distachyon
Bradi1g24250 5.0kb upstream 5.0kb upstream 8365 true Bd1: 19482556-19490920 Brachypodium distachyon
Bradi1g24250 5.0kb upstream 5.0kb upstream 5000 false Bd1: 19482556-19487555 Brachypodium distachyon
Bradi1g24250 5.0kb downstream 5.0kb downstream 8365 true Bd1: 19487556-19495920 Brachypodium distachyon
Bradi1g24250 5.0kb downstream 5.0kb downstream 5000 false Bd1: 19490921-19495920 Brachypodium distachyon
Bradi1g24250 10.0kb upstream 10.0kb upstream 13365 true Bd1: 19477556-19490920 Brachypodium distachyon
Bradi1g24250 10.0kb upstream 10.0kb upstream 10000 false Bd1: 19477556-19487555 Brachypodium distachyon
Bradi1g24250 10.0kb downstream 10.0kb downstream 13365 true Bd1: 19487556-19500920 Brachypodium distachyon
Bradi1g24250 10.0kb downstream 10.0kb downstream 10000 false Bd1: 19490921-19500920 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589976 5269 Grass View MSA
122051187 5273 Angiosperm View MSA
121344668 5274 Embryophyte View MSA
123427529 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.728        
cufflinks 9.525       High
cufflinks 8.65        
cufflinks 9.917       High
cufflinks 3.082        
cufflinks 7.016        
cufflinks 8.25        
cufflinks 5.022        
cufflinks 5.321        
cufflinks 6.745        
cufflinks 5.057        
cufflinks 6.326        
cufflinks 4.864        
cufflinks 4.668        
cufflinks 4.205        
cufflinks 8.081        
cufflinks 5.542        
cufflinks 1.185       Low
cufflinks 5.038        
cufflinks 1.512       Low
cufflinks 4.139        
cufflinks 6.247        
cufflinks 4.138        
cufflinks 5.115        
cufflinks 6.489        
cufflinks 9.786       High
cufflinks 4.154        
cufflinks 8.732        
cufflinks 8.681        
cufflinks 6.697        

0 Strain