Gene : Bradi1g24431 B. distachyon v3.1
Defline:  (1 of 1) KOG2623 - Tyrosyl-tRNA synthetase Genomic Order:  3068
Name:  ? Bradi1g24431 Secondary Identifier:  ? PAC:32793889
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon TRNA-CHARGING-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g24431 0.5kb upstream 0.5kb upstream 3762 true Bd1: 19630803-19634564 Brachypodium distachyon
Bradi1g24431 0.5kb upstream 0.5kb upstream 500 false Bd1: 19630803-19631302 Brachypodium distachyon
Bradi1g24431 0.5kb downstream 0.5kb downstream 3762 true Bd1: 19631303-19635064 Brachypodium distachyon
Bradi1g24431 0.5kb downstream 0.5kb downstream 500 false Bd1: 19634565-19635064 Brachypodium distachyon
Bradi1g24431 1.0kb upstream 1.0kb upstream 4262 true Bd1: 19630303-19634564 Brachypodium distachyon
Bradi1g24431 1.0kb upstream 1.0kb upstream 1000 false Bd1: 19630303-19631302 Brachypodium distachyon
Bradi1g24431 1.0kb downstream 1.0kb downstream 4262 true Bd1: 19631303-19635564 Brachypodium distachyon
Bradi1g24431 1.0kb downstream 1.0kb downstream 1000 false Bd1: 19634565-19635564 Brachypodium distachyon
Bradi1g24431 2.0kb upstream 2.0kb upstream 5262 true Bd1: 19629303-19634564 Brachypodium distachyon
Bradi1g24431 2.0kb upstream 2.0kb upstream 2000 false Bd1: 19629303-19631302 Brachypodium distachyon
Bradi1g24431 2.0kb downstream 2.0kb downstream 5262 true Bd1: 19631303-19636564 Brachypodium distachyon
Bradi1g24431 2.0kb downstream 2.0kb downstream 2000 false Bd1: 19634565-19636564 Brachypodium distachyon
Bradi1g24431 5.0kb upstream 5.0kb upstream 8262 true Bd1: 19626303-19634564 Brachypodium distachyon
Bradi1g24431 5.0kb upstream 5.0kb upstream 5000 false Bd1: 19626303-19631302 Brachypodium distachyon
Bradi1g24431 5.0kb downstream 5.0kb downstream 8262 true Bd1: 19631303-19639564 Brachypodium distachyon
Bradi1g24431 5.0kb downstream 5.0kb downstream 5000 false Bd1: 19634565-19639564 Brachypodium distachyon
Bradi1g24431 10.0kb upstream 10.0kb upstream 13262 true Bd1: 19621303-19634564 Brachypodium distachyon
Bradi1g24431 10.0kb upstream 10.0kb upstream 10000 false Bd1: 19621303-19631302 Brachypodium distachyon
Bradi1g24431 10.0kb downstream 10.0kb downstream 13262 true Bd1: 19631303-19644564 Brachypodium distachyon
Bradi1g24431 10.0kb downstream 10.0kb downstream 10000 false Bd1: 19634565-19644564 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584962 5269 Grass View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.006     Low Low
cufflinks 0.036     Low  
cufflinks 0.036     Low  
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.02     Low  
cufflinks 0.014     Low  
cufflinks 0.031     Low  
cufflinks 0.015     Low  
cufflinks 0.056     Low High
cufflinks 0.01     Low Low
cufflinks 0.013     Low  
cufflinks 0.014     Low  
cufflinks 0.005     Low Low
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.006     Low Low
cufflinks 0.045     Low  
cufflinks 0.026     Low  
cufflinks 0.055     Low High
cufflinks 0.029     Low  
cufflinks 0.065     Low High
cufflinks 0.022     Low  
cufflinks 0.045     Low  
cufflinks 0.054     Low High
cufflinks 0.024     Low  

0 Strain