Gene : Bradi1g24400 B. distachyon v3.1
Defline:  (1 of 1) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  3062
Name:  ? Bradi1g24400 Secondary Identifier:  ? PAC:32791917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g24400 0.5kb upstream 0.5kb upstream 5088 true Bd1: 19590614-19595701 Brachypodium distachyon
Bradi1g24400 0.5kb upstream 0.5kb upstream 500 false Bd1: 19590614-19591113 Brachypodium distachyon
Bradi1g24400 0.5kb downstream 0.5kb downstream 5088 true Bd1: 19591114-19596201 Brachypodium distachyon
Bradi1g24400 0.5kb downstream 0.5kb downstream 500 false Bd1: 19595702-19596201 Brachypodium distachyon
Bradi1g24400 1.0kb upstream 1.0kb upstream 5588 true Bd1: 19590114-19595701 Brachypodium distachyon
Bradi1g24400 1.0kb upstream 1.0kb upstream 1000 false Bd1: 19590114-19591113 Brachypodium distachyon
Bradi1g24400 1.0kb downstream 1.0kb downstream 5588 true Bd1: 19591114-19596701 Brachypodium distachyon
Bradi1g24400 1.0kb downstream 1.0kb downstream 1000 false Bd1: 19595702-19596701 Brachypodium distachyon
Bradi1g24400 2.0kb upstream 2.0kb upstream 6588 true Bd1: 19589114-19595701 Brachypodium distachyon
Bradi1g24400 2.0kb upstream 2.0kb upstream 2000 false Bd1: 19589114-19591113 Brachypodium distachyon
Bradi1g24400 2.0kb downstream 2.0kb downstream 6588 true Bd1: 19591114-19597701 Brachypodium distachyon
Bradi1g24400 2.0kb downstream 2.0kb downstream 2000 false Bd1: 19595702-19597701 Brachypodium distachyon
Bradi1g24400 5.0kb upstream 5.0kb upstream 9588 true Bd1: 19586114-19595701 Brachypodium distachyon
Bradi1g24400 5.0kb upstream 5.0kb upstream 5000 false Bd1: 19586114-19591113 Brachypodium distachyon
Bradi1g24400 5.0kb downstream 5.0kb downstream 9588 true Bd1: 19591114-19600701 Brachypodium distachyon
Bradi1g24400 5.0kb downstream 5.0kb downstream 5000 false Bd1: 19595702-19600701 Brachypodium distachyon
Bradi1g24400 10.0kb upstream 10.0kb upstream 14588 true Bd1: 19581114-19595701 Brachypodium distachyon
Bradi1g24400 10.0kb upstream 10.0kb upstream 10000 false Bd1: 19581114-19591113 Brachypodium distachyon
Bradi1g24400 10.0kb downstream 10.0kb downstream 14588 true Bd1: 19591114-19605701 Brachypodium distachyon
Bradi1g24400 10.0kb downstream 10.0kb downstream 10000 false Bd1: 19595702-19605701 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
124571275 5269 Grass View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.645        
cufflinks 2.658        
cufflinks 2.649        
cufflinks 2.395        
cufflinks 1.609        
cufflinks 2.299        
cufflinks 2.456        
cufflinks 1.945        
cufflinks 2.274        
cufflinks 2.418        
cufflinks 1.388       Low
cufflinks 2.116        
cufflinks 0.728       Low
cufflinks 0.924       Low
cufflinks 1.535        
cufflinks 2.277        
cufflinks 2.582        
cufflinks 5.464       High
cufflinks 5.486       High
cufflinks 1.701        
cufflinks 3.582        
cufflinks 2.2        
cufflinks 1.744        
cufflinks 1.947        
cufflinks 2.199        
cufflinks 2.488        
cufflinks 1.693        
cufflinks 2.566        
cufflinks 2.483        
cufflinks 3.518        

0 Strain