Gene : Bradi1g24547 B. distachyon v3.1
Defline:  (1 of 2) 1.13.11.53 - Acireductone dioxygenase (Ni(2+)-requiring) / E-2 Genomic Order:  3088
Name:  ? Bradi1g24547 Secondary Identifier:  ? PAC:32805558
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-4361 Brachypodium distachyon pathologic  
Bdistachyon PWY-5389 Brachypodium distachyon pathologic  
Bdistachyon PWY-7270 Brachypodium distachyon pathologic  
Bdistachyon PWY-7528 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g24547 0.5kb upstream 0.5kb upstream 3259 true Bd1: 19831331-19834589 Brachypodium distachyon
Bradi1g24547 0.5kb upstream 0.5kb upstream 500 false Bd1: 19831331-19831830 Brachypodium distachyon
Bradi1g24547 0.5kb downstream 0.5kb downstream 3259 true Bd1: 19831831-19835089 Brachypodium distachyon
Bradi1g24547 0.5kb downstream 0.5kb downstream 500 false Bd1: 19834590-19835089 Brachypodium distachyon
Bradi1g24547 1.0kb upstream 1.0kb upstream 3759 true Bd1: 19830831-19834589 Brachypodium distachyon
Bradi1g24547 1.0kb upstream 1.0kb upstream 1000 false Bd1: 19830831-19831830 Brachypodium distachyon
Bradi1g24547 1.0kb downstream 1.0kb downstream 3759 true Bd1: 19831831-19835589 Brachypodium distachyon
Bradi1g24547 1.0kb downstream 1.0kb downstream 1000 false Bd1: 19834590-19835589 Brachypodium distachyon
Bradi1g24547 2.0kb upstream 2.0kb upstream 4759 true Bd1: 19829831-19834589 Brachypodium distachyon
Bradi1g24547 2.0kb upstream 2.0kb upstream 2000 false Bd1: 19829831-19831830 Brachypodium distachyon
Bradi1g24547 2.0kb downstream 2.0kb downstream 4759 true Bd1: 19831831-19836589 Brachypodium distachyon
Bradi1g24547 2.0kb downstream 2.0kb downstream 2000 false Bd1: 19834590-19836589 Brachypodium distachyon
Bradi1g24547 5.0kb upstream 5.0kb upstream 7759 true Bd1: 19826831-19834589 Brachypodium distachyon
Bradi1g24547 5.0kb upstream 5.0kb upstream 5000 false Bd1: 19826831-19831830 Brachypodium distachyon
Bradi1g24547 5.0kb downstream 5.0kb downstream 7759 true Bd1: 19831831-19839589 Brachypodium distachyon
Bradi1g24547 5.0kb downstream 5.0kb downstream 5000 false Bd1: 19834590-19839589 Brachypodium distachyon
Bradi1g24547 10.0kb upstream 10.0kb upstream 12759 true Bd1: 19821831-19834589 Brachypodium distachyon
Bradi1g24547 10.0kb upstream 10.0kb upstream 10000 false Bd1: 19821831-19831830 Brachypodium distachyon
Bradi1g24547 10.0kb downstream 10.0kb downstream 12759 true Bd1: 19831831-19844589 Brachypodium distachyon
Bradi1g24547 10.0kb downstream 10.0kb downstream 10000 false Bd1: 19834590-19844589 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587161 5269 Grass View MSA
122046510 5273 Angiosperm View MSA
121343851 5274 Embryophyte View MSA
123424670 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.816     High  
cufflinks 38.016     High  
cufflinks 38.547     High  
cufflinks 55.139     High  
cufflinks 44.174     High  
cufflinks 31.806     High Low
cufflinks 34.37     High  
cufflinks 26.762     High Low
cufflinks 32.88     High Low
cufflinks 42.539     High  
cufflinks 53.433     High  
cufflinks 40.885     High  
cufflinks 38.487     High  
cufflinks 52.556     High  
cufflinks 44.628     High  
cufflinks 31.321     High Low
cufflinks 48.152     High  
cufflinks 110.236     High High
cufflinks 54.314     High  
cufflinks 65.817     High  
cufflinks 69.071     High High
cufflinks 33.287     High Low
cufflinks 30.488     High Low
cufflinks 34.313     High  
cufflinks 38.954     High  
cufflinks 58.354     High  
cufflinks 55.846     High  
cufflinks 45.243     High  
cufflinks 36.799     High  
cufflinks 58.482     High  

0 Strain