Gene : Bradi1g24620 B. distachyon v3.1
Defline:  (1 of 5) K17871 - NADH:ubiquinone reductase (non-electrogenic) (ndh1) Genomic Order:  3098
Name:  ? Bradi1g24620 Secondary Identifier:  ? PAC:32801724
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7279 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g24620 0.5kb upstream 0.5kb upstream 3625 true Bd1: 19905311-19908935 Brachypodium distachyon
Bradi1g24620 0.5kb upstream 0.5kb upstream 500 false Bd1: 19908436-19908935 Brachypodium distachyon
Bradi1g24620 0.5kb downstream 0.5kb downstream 3625 true Bd1: 19904811-19908435 Brachypodium distachyon
Bradi1g24620 0.5kb downstream 0.5kb downstream 500 false Bd1: 19904811-19905310 Brachypodium distachyon
Bradi1g24620 1.0kb upstream 1.0kb upstream 4125 true Bd1: 19905311-19909435 Brachypodium distachyon
Bradi1g24620 1.0kb upstream 1.0kb upstream 1000 false Bd1: 19908436-19909435 Brachypodium distachyon
Bradi1g24620 1.0kb downstream 1.0kb downstream 4125 true Bd1: 19904311-19908435 Brachypodium distachyon
Bradi1g24620 1.0kb downstream 1.0kb downstream 1000 false Bd1: 19904311-19905310 Brachypodium distachyon
Bradi1g24620 2.0kb upstream 2.0kb upstream 5125 true Bd1: 19905311-19910435 Brachypodium distachyon
Bradi1g24620 2.0kb upstream 2.0kb upstream 2000 false Bd1: 19908436-19910435 Brachypodium distachyon
Bradi1g24620 2.0kb downstream 2.0kb downstream 5125 true Bd1: 19903311-19908435 Brachypodium distachyon
Bradi1g24620 2.0kb downstream 2.0kb downstream 2000 false Bd1: 19903311-19905310 Brachypodium distachyon
Bradi1g24620 5.0kb upstream 5.0kb upstream 8125 true Bd1: 19905311-19913435 Brachypodium distachyon
Bradi1g24620 5.0kb upstream 5.0kb upstream 5000 false Bd1: 19908436-19913435 Brachypodium distachyon
Bradi1g24620 5.0kb downstream 5.0kb downstream 8125 true Bd1: 19900311-19908435 Brachypodium distachyon
Bradi1g24620 5.0kb downstream 5.0kb downstream 5000 false Bd1: 19900311-19905310 Brachypodium distachyon
Bradi1g24620 10.0kb upstream 10.0kb upstream 13125 true Bd1: 19905311-19918435 Brachypodium distachyon
Bradi1g24620 10.0kb upstream 10.0kb upstream 10000 false Bd1: 19908436-19918435 Brachypodium distachyon
Bradi1g24620 10.0kb downstream 10.0kb downstream 13125 true Bd1: 19895311-19908435 Brachypodium distachyon
Bradi1g24620 10.0kb downstream 10.0kb downstream 10000 false Bd1: 19895311-19905310 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569749 5269 Grass View MSA
122050116 5273 Angiosperm View MSA
121344067 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low  
cufflinks 0.018     Low  
cufflinks 0.012     Low  
cufflinks 0.008     Low  
cufflinks 0.015     Low  
cufflinks 0.014     Low  
cufflinks 0.005     Low Low
cufflinks 0.019     Low  
cufflinks 0.023     Low  
cufflinks 0.003     Low Low
cufflinks 0.053     Low High
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.011     Low  
cufflinks 0.007     Low  
cufflinks 0.014     Low  
cufflinks 0.025     Low  
cufflinks 0.011     Low  
cufflinks 0.059     Low High
cufflinks 0.016     Low  
cufflinks 0.035     Low  
cufflinks 0.014     Low  

0 Strain