Gene : Bradi1g24730 B. distachyon v3.1
Defline:  (1 of 2) K04718 - sphingosine kinase (SPHK) Genomic Order:  3111
Name:  ? Bradi1g24730 Secondary Identifier:  ? PAC:32794744
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5129 Brachypodium distachyon pathologic  
Bdistachyon PWY-6483 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g24730 0.5kb upstream 0.5kb upstream 4923 true Bd1: 19994612-19999534 Brachypodium distachyon
Bradi1g24730 0.5kb upstream 0.5kb upstream 500 false Bd1: 19999035-19999534 Brachypodium distachyon
Bradi1g24730 0.5kb downstream 0.5kb downstream 4923 true Bd1: 19994112-19999034 Brachypodium distachyon
Bradi1g24730 0.5kb downstream 0.5kb downstream 500 false Bd1: 19994112-19994611 Brachypodium distachyon
Bradi1g24730 1.0kb upstream 1.0kb upstream 5423 true Bd1: 19994612-20000034 Brachypodium distachyon
Bradi1g24730 1.0kb upstream 1.0kb upstream 1000 false Bd1: 19999035-20000034 Brachypodium distachyon
Bradi1g24730 1.0kb downstream 1.0kb downstream 5423 true Bd1: 19993612-19999034 Brachypodium distachyon
Bradi1g24730 1.0kb downstream 1.0kb downstream 1000 false Bd1: 19993612-19994611 Brachypodium distachyon
Bradi1g24730 2.0kb upstream 2.0kb upstream 6423 true Bd1: 19994612-20001034 Brachypodium distachyon
Bradi1g24730 2.0kb upstream 2.0kb upstream 2000 false Bd1: 19999035-20001034 Brachypodium distachyon
Bradi1g24730 2.0kb downstream 2.0kb downstream 6423 true Bd1: 19992612-19999034 Brachypodium distachyon
Bradi1g24730 2.0kb downstream 2.0kb downstream 2000 false Bd1: 19992612-19994611 Brachypodium distachyon
Bradi1g24730 5.0kb upstream 5.0kb upstream 9423 true Bd1: 19994612-20004034 Brachypodium distachyon
Bradi1g24730 5.0kb upstream 5.0kb upstream 5000 false Bd1: 19999035-20004034 Brachypodium distachyon
Bradi1g24730 5.0kb downstream 5.0kb downstream 9423 true Bd1: 19989612-19999034 Brachypodium distachyon
Bradi1g24730 5.0kb downstream 5.0kb downstream 5000 false Bd1: 19989612-19994611 Brachypodium distachyon
Bradi1g24730 10.0kb upstream 10.0kb upstream 14423 true Bd1: 19994612-20009034 Brachypodium distachyon
Bradi1g24730 10.0kb upstream 10.0kb upstream 10000 false Bd1: 19999035-20009034 Brachypodium distachyon
Bradi1g24730 10.0kb downstream 10.0kb downstream 14423 true Bd1: 19984612-19999034 Brachypodium distachyon
Bradi1g24730 10.0kb downstream 10.0kb downstream 10000 false Bd1: 19984612-19994611 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586280 5269 Grass View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.229        
cufflinks 1.738        
cufflinks 2.274        
cufflinks 1.788        
cufflinks 1.896        
cufflinks 1.758        
cufflinks 1.591       Low
cufflinks 1.934        
cufflinks 1.853        
cufflinks 2.628        
cufflinks 3.167       High
cufflinks 2.183        
cufflinks 2.286        
cufflinks 2.553        
cufflinks 2.74        
cufflinks 1.811        
cufflinks 1.899        
cufflinks 3.088       High
cufflinks 2.521        
cufflinks 1.856        
cufflinks 2.429        
cufflinks 2.98       High
cufflinks 1.974        
cufflinks 1.788        
cufflinks 1.509       Low
cufflinks 2.267        
cufflinks 3.051       High
cufflinks 2.27        
cufflinks 2.334        
cufflinks 2.341        

0 Strain